Gene: AT5G59770
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G59770
- Transcript Identifier AT5G59770.1
- Gene Type Coding gene
- Location Chr5 : 24079521-24081074 : negative
Gene Family Information
- ID HOM05D007195
- #Genes/#Species 110/88
- Phylogenetic origin
- ID ORTHO05D008939
- #Genes/#Species 112/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G59770.1
- uniprot Q8GW27
Descriptions
- Description Protein-tyrosine phosphatase-like, PTPLA
- Computational description Protein-tyrosine phosphatase-like, PTPLA; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA (InterPro:IPR007482); BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA (TAIR:AT5G10480.2); Has 698 Blast hits to 698 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 336; Fungi - 172; Plants - 117; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006631 | IEA | GOA Database | fatty acid metabolic process | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process | |
| GO:0006633 | IEA | GOA Database | fatty acid biosynthetic process | |
| GO:0042761 | IBA | Gene Ontology | very long-chain fatty acid biosynthetic process | 1 |
| GO:0030497 | IBA | Gene Ontology | fatty acid elongation | 1 |
| GO:0030148 | IBA | Gene Ontology | sphingolipid biosynthetic process | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0102158 | IEA | Gene Ontology | very-long-chain 3-hydroxyacyl-CoA dehydratase activity | |
| GO:0018812 | IBA | Gene Ontology | 3-hydroxyacyl-CoA dehydratase activity | 1 |
| GO:0102345 | IEA | Gene Ontology | 3-hydroxy-lignoceroyl-CoA dehydratase activity | |
| GO:0102344 | IEA | Gene Ontology | 3-hydroxy-behenoyl-CoA dehydratase activity | |
| GO:0102343 | IEA | Gene Ontology | 3-hydroxy-arachidoyl-CoA dehydratase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030176 | IBA | Gene Ontology | integral component of endoplasmic reticulum membrane | 1 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007482 | Protein-tyrosine phosphatase-like, PTPLA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |