Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p63980 Brassica napus
Aa31LG1G2430 Aethionema arabicum
Actinidia02105 Actinidia chinensis
Ah.02g116970 Amaranthus hybridus
AL1G23540 Arabidopsis lyrata
Aqoxy5G03933 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea
AT1G12250 Arabidopsis thaliana
ATR0568G204 Amborella trichopoda
Atru.chr9.1388 Acer truncatum
AUR62007471 Chenopodium quinoa
AUR62039929 Chenopodium quinoa
AUR62043761 Chenopodium quinoa
BcaC07g41714 Brassica carinata
BcaC07g42568 Brassica carinata
BolC8t52291H Brassica oleracea
BraA09t41747Z Brassica rapa
C08p47500 Brassica napus
CAN.G1217.21 Capsicum annuum
CAN.G1293.1 Capsicum annuum
CANSAT21G0465 Cannabis sativa
CARHR012560 Cardamine hirsuta
Carub.0001s1193 Capsella rubella
CBR_g19734 Chara braunii
Cc08_g12960 Coffea canephora
CDE04G0607 Ceratophyllum demersum
CDE04G1356 Ceratophyllum demersum
Cfa012777 Carpinus fangiana
Ciclev10021545m.g Citrus clementina
CiPaw.12G106400 Carya illinoinensis
ClCG01G003790 Citrullus lanatus
COL.COLO4_37221 Corchorus olitorius
COL.COLO4_37223 Corchorus olitorius
Cpa.g.sc29.119 Carica papaya
Cre17.g721700 Chlamydomonas reinhardtii
CsaV3_5G003940 Cucumis sativus L.
CSS0025302 Camellia sinensis var. sinensis
CSS0040813 Camellia sinensis var. sinensis
DCAR_004919 Daucus carota
Dinv39100 Davidia involucrata
Duzib205G0297 Durio zibethinus
ECA232G1654 Erigeron canadensis
EL10Ac5g13006 Beta vulgaris
Eucgr.D02028 Eucalyptus grandis
FAN04G1528 Fragaria x ananassa
FAN08G1089 Fragaria x ananassa
FAN13G1422 Fragaria x ananassa
FAN18G0001 Fragaria x ananassa
FvH4_5g00330 Fragaria vesca
Glyma.01G211100 Glycine max
Glyma.11G030700 Glycine max
Gohir.A08G172400 Gossypium hirsutum
Gohir.D08G190800 Gossypium hirsutum
Gorai.004G200900 Gossypium raimondii
GSVIVG01001267001 Vitis vinifera
GSVIVG01001268001 Vitis vinifera
HanXRQChr02g0049591 Helianthus annuus
Haze_08582 Corylus avellana
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla
HPP92_003260 Vanilla planifolia
Hund11577 Selenicereus undatus
Lalb_Chr16g0379721 Lupinus albus
Lj2g0026876 Lotus japonicus
Lj8A257G61 Lonicera japonica
Lsat_1_v5_gn_6_2361 Lactuca sativa
Manes.01G076100 Manihot esculenta
Mapoly0083s0077 Marchantia polymorpha
MCO04G309 Micromonas commoda
MCO12G419 Micromonas commoda
MD06G1065500 Malus domestica
MD16G1171100 Malus domestica
Medtr5g012110 Medicago truncatula
MELO3C005562.2 Cucumis melo
Migut.A00806 Erythranthe guttata
MSTRG.25539 Avicennia marina
Nitab4.5_0000993g0090 Nicotiana tabacum
Nitab4.5_0005649g0010 Nicotiana tabacum
Nn6g34047 Nelumbo nucifera
Os02g0643500 Oryza sativa ssp. japonica
Peaxi162Scf00002g00075 Petunia axillaris
PGR031G1282 Punica granatum
PGSC0003DMG400004788 Solanum tuberosum
Phvul.002G061100 Phaseolus vulgaris
Potri.003G112900 Populus trichocarpa
Pp3c21_17930 Physcomitrium patens
Prupe.5G075900 Prunus persica
Psat2g178680 Pisum sativum
PSO063G0503 Papaver somniferum
PSO782G2909 Papaver somniferum
QL12p014002 Quercus lobata
RcHm_v2.0_Chr7g0202221 Rosa chinensis
Sabra03G0078200 Salix brachista
SalBow6G7097 Salvia bowleyana
Sc06g0007370 Simmondsia chinensis
Sed0027513 Sechium edule
SEGI_22381 Sequoiadendron giganteum
SEGI_25676 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32845 Striga asiatica
SMO137G0193 Selaginella moellendorffii
Solyc08g079110.4 Solanum lycopersicum
Sopen08g027570 Solanum pennellii
Sp1g10870 Schrenkiella parvula
TAR375G0275 Trochodendron aralioides
THA.LOC104818475 Tarenaya hassleriana
Thecc.03G257500 Theobroma cacao
Thhalv10008422m.g Eutrema salsugineum
TPR.G25898 Trifolium pratense
TWI60G0310 Tripterygium wilfordii
vmacro05405 Vaccinium macrocarpon
VMungo1215G0274 Vigna mungo
Zm00001eb248670 Zea mays

User provided reference genes

Program Settings