Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p18060 Brassica napus
Aa31LG4G18110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3040 Anthoceros agrestis
Actinidia36388 Actinidia chinensis
Ah.03g134430 Amaranthus hybridus
AL5G29490 Arabidopsis lyrata
Aqoxy6G00621 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K8CYMK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZF5H4 Arachis hypogaea
AT3G49640 Arabidopsis thaliana
ATR0697G179 Amborella trichopoda
Atru.chr3.1139 Acer truncatum
AUR62005879 Chenopodium quinoa
AUR62032872 Chenopodium quinoa
BcaB01g00687 Brassica carinata
BcaC07g39427 Brassica carinata
BolC8t50081H Brassica oleracea
BraA06t24896Z Brassica rapa
C08p24660 Brassica napus
CAN.G268.11 Capsicum annuum
CAN.G65.166 Capsicum annuum
CANSAT01G0575 Cannabis sativa
CARHR158670 Cardamine hirsuta
Carub.0005s1598 Capsella rubella
Ca_22636_v3 Cicer arietinum L.
CBR_g18738 Chara braunii
Cc07_g07740 Coffea canephora
CDE01G0563 Ceratophyllum demersum
Cfa006816 Carpinus fangiana
Cfa022401 Carpinus fangiana
Ciclev10026068m.g Citrus clementina
CiPaw.07G041500 Carya illinoinensis
ClCG01G018110 Citrullus lanatus
COL.COLO4_11668 Corchorus olitorius
Cpa.g.sc129.26 Carica papaya
Cre13.g592300 Chlamydomonas reinhardtii
CsaV3_6G044650 Cucumis sativus L.
DCAR_025846 Daucus carota
Dinv26994 Davidia involucrata
Dinv36989 Davidia involucrata
Duzib147G1315 Durio zibethinus
ECA238G4796 Erigeron canadensis
EL10Ac6g13296 Beta vulgaris
Eucgr.H02404 Eucalyptus grandis
Glyma.01G097500 Glycine max
Glyma.08G273200 Glycine max
Gohir.A02G146800 Gossypium hirsutum
Gohir.D03G033700 Gossypium hirsutum
Gorai.003G035300 Gossypium raimondii
GSVIVG01003711001 Vitis vinifera
GSVIVG01005613001 Vitis vinifera
HanXRQChr07g0192781 Helianthus annuus
Haze_03942 Corylus avellana
Hma1.2p1_0996F.1_g245950 Hydrangea macrophylla
Hma1.2p1_1119F.1_g259150 Hydrangea macrophylla
Hund14163 Selenicereus undatus
Hund25787 Selenicereus undatus
Lalb_Chr05g0228901 Lupinus albus
Lj3g0003372 Lotus japonicus
Lj4C174T3 Lonicera japonica
Lsat_1_v5_gn_2_82020 Lactuca sativa
Lsat_1_v5_gn_5_158981 Lactuca sativa
Manes.12G120300 Manihot esculenta
Mapoly0035s0067 Marchantia polymorpha
MBI16_g17836_MAGBIO Magnolia biondii
MCO10G301 Micromonas commoda
MD06G1013700 Malus domestica
Medtr8g006745 Medicago truncatula
Medtr8g067420 Medicago truncatula
MELO3C007688.2 Cucumis melo
Migut.H00302 Erythranthe guttata
MSTRG.15333 Avicennia marina
Nitab4.5_0002084g0080 Nicotiana tabacum
Nitab4.5_0008244g0010 Nicotiana tabacum
Nn5g29755 Nelumbo nucifera
Oeu054743.1 Olea europaea
Os04g0531300 Oryza sativa ssp. japonica
Peaxi162Scf00413g00053 Petunia axillaris
PGSC0003DMG401027015 Solanum tuberosum
Phvul.003G285100 Phaseolus vulgaris
Pp3c17_7260 Physcomitrium patens
Pp3c1_32580 Physcomitrium patens
PRCOL_00000013 Prasinoderma coloniale
Prupe.5G015900 Prunus persica
Psat4g120720 Pisum sativum
PSO675G1235 Papaver somniferum
PSO675G3949 Papaver somniferum
QL06p037629 Quercus lobata
QL06p037642 Quercus lobata
RcHm_v2.0_Chr7g0214881 Rosa chinensis
RcHm_v2.0_Chr7g0219891 Rosa chinensis
Rhsim10G0082100 Rhododendron simsii
SalBow3G2833 Salvia bowleyana
SalBow3G3759 Salvia bowleyana
Sc16g0000770 Simmondsia chinensis
Sed0007427 Sechium edule
SEGI_24730 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33110 Striga asiatica
SHI12076 Sapria himalayana
SMO143G0313 Selaginella moellendorffii
Solyc06g073230.4 Solanum lycopersicum
Sopen06g029590 Solanum pennellii
Sp5g12460 Schrenkiella parvula
TAR628G0428 Trochodendron aralioides
Thecc.01G082300 Theobroma cacao
Thhalv10010537m.g Eutrema salsugineum
TPR.G15263 Trifolium pratense
TPR.G32548 Trifolium pratense
TWI74G0708 Tripterygium wilfordii
unitig_744.g24333 Utricularia gibba
vmacro05475 Vaccinium macrocarpon
VMungo0251G1182 Vigna mungo
VMungo0251G2786 Vigna mungo
Zm00001eb427250 Zea mays

User provided reference genes

Program Settings