Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p01180 Brassica napus
Aa31LG1G21700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis
Actinidia26657 Actinidia chinensis
Actinidia28914 Actinidia chinensis
AL6G12830 Arabidopsis lyrata
Aqoxy2G01713 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea
AT5G03455 Arabidopsis thaliana
ATR0723G063 Amborella trichopoda
Atru.chr8.1773 Acer truncatum
Atru.chr8.1776 Acer truncatum
AUR62026921 Chenopodium quinoa
AUR62042061 Chenopodium quinoa
BcaB01g05820 Brassica carinata
BcaB01g05838 Brassica carinata
BcaC06g32064 Brassica carinata
BolC3t12706H Brassica oleracea
BraA03t09500Z Brassica rapa
C03p01520 Brassica napus
CAN.G134.74 Capsicum annuum
CANSAT80G0954 Cannabis sativa
CARHR209870 Cardamine hirsuta
Carub.0006s0227 Capsella rubella
Ca_08913_v3 Cicer arietinum L.
Cc06_g04390 Coffea canephora
CDE02G4226 Ceratophyllum demersum
CDE08G0062 Ceratophyllum demersum
Cfa017635 Carpinus fangiana
Ciclev10013072m.g Citrus clementina
CiPaw.09G171000 Carya illinoinensis
ClCG04G009460 Citrullus lanatus
COL.COLO4_26935 Corchorus olitorius
Cpa.g.sc456.2 Carica papaya
CsaV3_6G040080 Cucumis sativus L.
CSS0008283 Camellia sinensis var. sinensis
CSS0013835 Camellia sinensis var. sinensis
DCAR_017669 Daucus carota
Dinv35800 Davidia involucrata
Dinv37325 Davidia involucrata
Duzib106G1710 Durio zibethinus
ECA233G5925 Erigeron canadensis
EL10Ac7g16659 Beta vulgaris
Eucgr.A01658 Eucalyptus grandis
FAN02G4365 Fragaria x ananassa
FAN05G0469 Fragaria x ananassa
FAN05G0824 Fragaria x ananassa
FAN14G1959 Fragaria x ananassa
FvH4_6g16580 Fragaria vesca
Glyma.19G185200 Glycine max
Gohir.A09G145200 Gossypium hirsutum
Gohir.D09G141300 Gossypium hirsutum
Gorai.006G162200 Gossypium raimondii
GSVIVG01033661001 Vitis vinifera
HanXRQChr02g0051701 Helianthus annuus
HanXRQChr13g0400861 Helianthus annuus
Haze_20517 Corylus avellana
Haze_20905 Corylus avellana
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla
HPP92_025582 Vanilla planifolia
HPP92_025583 Vanilla planifolia
Lalb_Chr25g0288931 Lupinus albus
Lj1g0019165 Lotus japonicus
Lsat_1_v5_gn_6_24461 Lactuca sativa
Manes.16G055400 Manihot esculenta
Mapoly0029s0104 Marchantia polymorpha
MBI07_g19430_MAGBIO Magnolia biondii
MD12G1109000 Malus domestica
Medtr7g102310 Medicago truncatula
MELO3C024481.2 Cucumis melo
Migut.L01713 Erythranthe guttata
MSTRG.10329 Avicennia marina
Nitab4.5_0002247g0030 Nicotiana tabacum
Nitab4.5_0009274g0040 Nicotiana tabacum
Nitab4.5_0024714g0010 Nicotiana tabacum
Nn6g35256 Nelumbo nucifera
Os03g0108000 Oryza sativa ssp. japonica
Os10g0545700 Oryza sativa ssp. japonica
Peaxi162Scf00282g00715 Petunia axillaris
PGR004G1868 Punica granatum
PGR004G2181 Punica granatum
PGSC0003DMG400027515 Solanum tuberosum
Phvul.001G180100 Phaseolus vulgaris
Potri.006G122700 Populus trichocarpa
Pp3c1_27510 Physcomitrium patens
Prupe.7G127500 Prunus persica
Psat3g041600 Pisum sativum
PSO339G4731 Papaver somniferum
PSO801G0767 Papaver somniferum
QL07p042869 Quercus lobata
RcHm_v2.0_Chr3g0470511 Rosa chinensis
Sabra06G0096900 Salix brachista
SalBow5G4376 Salvia bowleyana
SalBow5G4485 Salvia bowleyana
Sc20g0005620 Simmondsia chinensis
Sed0009232 Sechium edule
SEGI_23238 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14116 Striga asiatica
SMO118G0389 Selaginella moellendorffii
Solyc01g097140.4 Solanum lycopersicum
Sopen01g040820 Solanum pennellii
Sp6g39280 Schrenkiella parvula
TAR369G1149 Trochodendron aralioides
TAR633G0596 Trochodendron aralioides
THA.LOC104816356 Tarenaya hassleriana
Thecc.05G069400 Theobroma cacao
Thhalv10014956m.g Eutrema salsugineum
TPR.G15158 Trifolium pratense
TPR.G32820 Trifolium pratense
TWI74G0247 Tripterygium wilfordii
unitig_8.g4717 Utricularia gibba
vmacro07304 Vaccinium macrocarpon
VMungo1383G2370 Vigna mungo
Zm00001eb394010 Zea mays

User provided reference genes

Program Settings