Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01890 Brassica napus
Aa31LG8G15840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1345 Anthoceros agrestis
Actinidia04112 Actinidia chinensis
Actinidia24028 Actinidia chinensis
Ah.09g229580 Amaranthus hybridus
AL3G52100 Arabidopsis lyrata
Aqoxy7G03196 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2SJ209 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7H9XX Arachis hypogaea
AT2G18710 Arabidopsis thaliana
ATR0580G382 Amborella trichopoda
Atru.chr7.548 Acer truncatum
AUR62039977 Chenopodium quinoa
AUR62040286 Chenopodium quinoa
BcaB03g16664 Brassica carinata
BcaC06g36454 Brassica carinata
BolC7t40795H Brassica oleracea
BraA07t27989Z Brassica rapa
C07p04040 Brassica napus
CAN.G584.40 Capsicum annuum
CANSAT11G0081 Cannabis sativa
CARHR109300 Cardamine hirsuta
Carub.0003s3299 Capsella rubella
Ca_13264_v3 Cicer arietinum L.
CBR_g23006 Chara braunii
Cc06_g13810 Coffea canephora
CDE04G1353 Ceratophyllum demersum
CDE07G0969 Ceratophyllum demersum
Cfa013538 Carpinus fangiana
Ciclev10007941m.g Citrus clementina
CiPaw.07G187500 Carya illinoinensis
ClCG06G012940 Citrullus lanatus
COL.COLO4_00391 Corchorus olitorius
COL.COLO4_16067 Corchorus olitorius
Cpa.g.sc75.6 Carica papaya
Cre16.g681900 Chlamydomonas reinhardtii
CsaV3_1G029510 Cucumis sativus L.
CSS0009146 Camellia sinensis var. sinensis
CSS0027038 Camellia sinensis var. sinensis
DCAR_009903 Daucus carota
Dinv41295 Davidia involucrata
Duzib168G1624 Durio zibethinus
EL10Ac8g18856 Beta vulgaris
Eucgr.C02439 Eucalyptus grandis
Eucgr.F04416 Eucalyptus grandis
FAN07G2007 Fragaria x ananassa
FAN12G3745 Fragaria x ananassa
FvH4_4g08350 Fragaria vesca
Glyma.04G157300 Glycine max
Glyma.06G223700 Glycine max
Gohir.A05G006500 Gossypium hirsutum
Gohir.D05G007400 Gossypium hirsutum
Gorai.009G007500 Gossypium raimondii
GSVIVG01032310001 Vitis vinifera
HanXRQChr05g0136541 Helianthus annuus
Haze_22153 Corylus avellana
Hma1.2p1_0156F.1_g068780 Hydrangea macrophylla
HPP92_013473 Vanilla planifolia
Hund08996 Selenicereus undatus
Hund08997 Selenicereus undatus
Lalb_Chr11g0072371 Lupinus albus
Lj6g0015479 Lotus japonicus
Lj9A729G40 Lonicera japonica
Lsat_1_v5_gn_8_65481 Lactuca sativa
Manes.06G029400 Manihot esculenta
Mapoly0033s0078 Marchantia polymorpha
MCO14G520 Micromonas commoda
MCO14G543 Micromonas commoda
MD13G1262000 Malus domestica
Medtr2g460600 Medicago truncatula
MELO3C010164.2 Cucumis melo
Migut.J01435 Erythranthe guttata
MSTRG.6183 Avicennia marina
Nitab4.5_0000244g0040 Nicotiana tabacum
Nitab4.5_0008689g0030 Nicotiana tabacum
Nitab4.5_0009672g0040 Nicotiana tabacum
Nn8g40279 Nelumbo nucifera
Oeu052230.1 Olea europaea
Os08g0254500 Oryza sativa ssp. japonica
Peaxi162Scf00457g00213 Petunia axillaris
PGR102G2112 Punica granatum
PGSC0003DMG400027471 Solanum tuberosum
Phvul.009G206700 Phaseolus vulgaris
Potri.006G175300 Populus trichocarpa
Potri.018G097500 Populus trichocarpa
Pp3c16_5240 Physcomitrium patens
PRCOL_00001282 Prasinoderma coloniale
Prupe.1G095100 Prunus persica
Psat1g025280 Pisum sativum
PSO063G5552 Papaver somniferum
PSO782G4753 Papaver somniferum
QL02p096049 Quercus lobata
RcHm_v2.0_Chr4g0404181 Rosa chinensis
Rhsim01G0009700 Rhododendron simsii
Sabra06G0134100 Salix brachista
SalBow6G0188 Salvia bowleyana
SalBow6G1082 Salvia bowleyana
Sc14g0001120 Simmondsia chinensis
Sed0018519 Sechium edule
SEGI_15046 Sequoiadendron giganteum
SEGI_38372 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22509 Striga asiatica
SMO147G0170 Selaginella moellendorffii
Solyc07g006520.3 Solanum lycopersicum
Sopen07g002600 Solanum pennellii
Sp3g32210 Schrenkiella parvula
TAR625G0312 Trochodendron aralioides
THA.LOC104803512 Tarenaya hassleriana
Thecc.09G163300 Theobroma cacao
Thhalv10019560m.g Eutrema salsugineum
Thhalv10022631m.g Eutrema salsugineum
TPR.G6090 Trifolium pratense
TWI63G1451 Tripterygium wilfordii
vmacro13083 Vaccinium macrocarpon
VMungo1309G0656 Vigna mungo
Zm00001eb412690 Zea mays

User provided reference genes

Program Settings