Gene: AT2G18710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G18710
  • Transcript Identifier AT2G18710.1
  • Gene Type Coding gene
  • Location Chr2 : 8112231-8114452 : negative

Gene Family Information

  • ID HOM05D006856
  • #Genes/#Species 117/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G18710.1
  • symbol SCY1
  • uniprot Q38885

Descriptions

  • Description SECY homolog 1
  • Computational description SECY homolog 1 (SCY1); FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G31530.1); Has 9180 Blast hits to 9165 proteins in 2700 species: Archae - 72; Bacteria - 5385; Metazoa - 19; Fungi - 2; Plants - 102; Viruses - 0; Other Eukaryotes - 3600 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0006616
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane, translocation1
GO:0010027
ISS
Gene Ontologythylakoid membrane organization2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005048
IBA
Gene Ontologysignal sequence binding1
GO:0008320
IBA
Gene Ontologyprotein transmembrane transporter activity1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA
IBA
Gene Ontologychloroplast thylakoid membrane1 4
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0009579
IEA
GOA Databasethylakoid
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast5
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002208 SecY/SEC61-alpha family
IPR023201 SecY domain superfamily
Mapman id Description
23.1.5.2 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.component SecY1