Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19670 Brassica napus
Aa31LG9G12550 Aethionema arabicum
Actinidia08363 Actinidia chinensis
Actinidia08364 Actinidia chinensis
Actinidia17104 Actinidia chinensis
Ah.01g023710 Amaranthus hybridus
AL8G19090 Arabidopsis lyrata
Aqoxy1G00115 Aquilegia oxysepala
Aqoxy5G00920 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36ZQJX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7NAU0 Arachis hypogaea
AT5G42400 Arabidopsis thaliana
ATR0605G021 Amborella trichopoda
Atru.chr4.1658 Acer truncatum
AUR62011705 Chenopodium quinoa
AUR62012925 Chenopodium quinoa
BcaB07g31077 Brassica carinata
BcaC04g21996 Brassica carinata
BolC9t55397H Brassica oleracea
BraA09t37578Z Brassica rapa
C09p25030 Brassica napus
CAN.G911.31 Capsicum annuum
CANSAT25G3285 Cannabis sativa
CARHR285110 Cardamine hirsuta
Carub.0008s0676 Capsella rubella
Ca_02003_v3 Cicer arietinum L.
Cc10_g00060 Coffea canephora
CDE06G0375 Ceratophyllum demersum
CDE08G1215 Ceratophyllum demersum
Cfa014175 Carpinus fangiana
Ciclev10000043m.g Citrus clementina
CiPaw.07G129500 Carya illinoinensis
ClCG08G009140 Citrullus lanatus
COL.COLO4_16220 Corchorus olitorius
Cpa.g.sc36.86 Carica papaya
CsaV3_6G035990 Cucumis sativus L.
CSS0009542 Camellia sinensis var. sinensis
DCAR_009847 Daucus carota
Dinv05521 Davidia involucrata
Dinv35492 Davidia involucrata
Duzib093G1949 Durio zibethinus
ECA233G4915 Erigeron canadensis
EL10Ac9g21250 Beta vulgaris
Eucgr.F01958 Eucalyptus grandis
FAN04G0199 Fragaria x ananassa
FAN08G1517 Fragaria x ananassa
FAN13G2656 Fragaria x ananassa
FAN18G3902 Fragaria x ananassa
FvH4_5g26810 Fragaria vesca
Glyma.09G052200 Glycine max
Glyma.15G158500 Glycine max
Gohir.A02G087001 Gossypium hirsutum
Gohir.D02G101700 Gossypium hirsutum
Gorai.005G115300 Gossypium raimondii
GSVIVG01006875001 Vitis vinifera
HanXRQChr08g0226151 Helianthus annuus
Haze_22899 Corylus avellana
Hma1.2p1_0493F.1_g165130 Hydrangea macrophylla
HPP92_019647 Vanilla planifolia
Hund06168 Selenicereus undatus
Lalb_Chr15g0083831 Lupinus albus
Lalb_Chr18g0052171 Lupinus albus
Lj4A815T22 Lonicera japonica
Lj6g0016974 Lotus japonicus
Lsat_1_v5_gn_8_2261 Lactuca sativa
Manes.05G113300 Manihot esculenta
MBI01_g32850_MAGBIO Magnolia biondii
MD02G1278400 Malus domestica
MD07G1046400 Malus domestica
MD07G1046500 Malus domestica
Medtr2g036060 Medicago truncatula
MELO3C026511.2 Cucumis melo
Migut.C00328 Erythranthe guttata
MSTRG.24887 Avicennia marina
Nitab4.5_0000220g0010 Nicotiana tabacum
Nitab4.5_0007430g0010 Nicotiana tabacum
Nn6g31535 Nelumbo nucifera
Oeu000732.1 Olea europaea
Peaxi162Scf00675g00049 Petunia axillaris
PGR083G0876 Punica granatum
PGSC0003DMG400026847 Solanum tuberosum
PGSC0003DMG400026863 Solanum tuberosum
Phvul.009G241600 Phaseolus vulgaris
Potri.002G001000 Populus trichocarpa
Potri.005G260100 Populus trichocarpa
Prupe.2G042400 Prunus persica
Psat0s1135g0200 Pisum sativum
Psat1g149680 Pisum sativum
Psat1g176960 Pisum sativum
Psat3g007480 Pisum sativum
PSO017G2707 Papaver somniferum
PSO170G6410 Papaver somniferum
QL02p016503 Quercus lobata
RcHm_v2.0_Chr7g0217731 Rosa chinensis
Sabra05G0201300 Salix brachista
SalBow7G3917 Salvia bowleyana
Sc08g0002330 Simmondsia chinensis
Sed0005718 Sechium edule
SGA_v2.0_scaffold161G37836 Striga asiatica
SHI07931 Sapria himalayana
SHI07932 Sapria himalayana
SHI07933 Sapria himalayana
SHI07934 Sapria himalayana
SHI07935 Sapria himalayana
Solyc01g006880.4 Solanum lycopersicum
Sopen01g002870 Solanum pennellii
Sp7g08030 Schrenkiella parvula
TAR381G0829 Trochodendron aralioides
THA.LOC104801650 Tarenaya hassleriana
Thecc.08G096800 Theobroma cacao
Thhalv10003132m.g Eutrema salsugineum
TPR.G1724 Trifolium pratense
TWI34G1134 Tripterygium wilfordii
TWI60G0692 Tripterygium wilfordii
unitig_46.g17973 Utricularia gibba
vmacro13063 Vaccinium macrocarpon
VMungo1309G0756 Vigna mungo
Zm00001eb406010 Zea mays

User provided reference genes

Program Settings