Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17910 Brassica napus
Aa31LG5G5140 Aethionema arabicum
Aa31LG5G5150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis
Actinidia18386 Actinidia chinensis
AL4G27180 Arabidopsis lyrata
Aqoxy4G00084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea
AT2G31890 Arabidopsis thaliana
ATR0743G046 Amborella trichopoda
Atru.chr3.1966 Acer truncatum
AUR62002496 Chenopodium quinoa
AUR62023690 Chenopodium quinoa
BcaB01g04009 Brassica carinata
BcaC04g19536 Brassica carinata
BolC3t14481H Brassica oleracea
C03p21010 Brassica napus
CAN.G207.7 Capsicum annuum
CANSAT56G3581 Cannabis sativa
CARHR125600 Cardamine hirsuta
Carub.0004s1319 Capsella rubella
Ca_25786_v3 Cicer arietinum L.
CBR_g41140 Chara braunii
Cc03_g16180 Coffea canephora
Cfa008529 Carpinus fangiana
Ciclev10019183m.g Citrus clementina
CiPaw.02G125400 Carya illinoinensis
ClCG06G009900 Citrullus lanatus
COL.COLO4_07294 Corchorus olitorius
COL.COLO4_16044 Corchorus olitorius
Cpa.g.sc9.243 Carica papaya
Cre09.g389541 Chlamydomonas reinhardtii
Cre10.g441600 Chlamydomonas reinhardtii
Cre10.g459350 Chlamydomonas reinhardtii
CsaV3_2G011300 Cucumis sativus L.
CSS0000740 Camellia sinensis var. sinensis
Dinv33252 Davidia involucrata
Duzib168G0144 Durio zibethinus
ECA248G2491 Erigeron canadensis
EL10Ac3g06180 Beta vulgaris
Eucgr.H00246 Eucalyptus grandis
FAN23G2311 Fragaria x ananassa
FAN26G1372 Fragaria x ananassa
FAN28G0724 Fragaria x ananassa
FvH4_1g00100 Fragaria vesca
Glyma.03G015700 Glycine max
Glyma.07G076000 Glycine max
Gohir.A06G175100 Gossypium hirsutum
Gohir.D06G185000 Gossypium hirsutum
Gorai.010G216300 Gossypium raimondii
GSVIVG01038263001 Vitis vinifera
HanXRQChr12g0374641 Helianthus annuus
Haze_11111 Corylus avellana
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla
HPP92_011440 Vanilla planifolia
Hund22687 Selenicereus undatus
Lalb_Chr10g0097341 Lupinus albus
Lj3g0015930 Lotus japonicus
Lju124A5G21 Lonicera japonica
Lsat_1_v5_gn_6_92560 Lactuca sativa
Manes.01G009700 Manihot esculenta
Mapoly0069s0042 Marchantia polymorpha
Mapoly0276s0001 Marchantia polymorpha
MBI10_g27212_MAGBIO Magnolia biondii
MD11G1156300 Malus domestica
Medtr8g432340 Medicago truncatula
MELO3C008513.2 Cucumis melo
Migut.O00275 Erythranthe guttata
MSTRG.11562 Avicennia marina
Nitab4.5_0005148g0010 Nicotiana tabacum
Nitab4.5_0006083g0010 Nicotiana tabacum
Nn7g37422 Nelumbo nucifera
Oeu014980.1 Olea europaea
Os03g0425000 Oryza sativa ssp. japonica
Peaxi162Scf00057g01911 Petunia axillaris
PGR142G3161 Punica granatum
PGSC0003DMG400006459 Solanum tuberosum
Phvul.010G093100 Phaseolus vulgaris
Potri.017G001600 Populus trichocarpa
Pp3c3_28000 Physcomitrium patens
PRCOL_00001133 Prasinoderma coloniale
PRCOL_00005660 Prasinoderma coloniale
Prupe.6G118500 Prunus persica
Psat4g152520 Pisum sativum
PSO357G0106 Papaver somniferum
QL10p064688 Quercus lobata
QL10p065815 Quercus lobata
RcHm_v2.0_Chr2g0084391 Rosa chinensis
Sabra17G0005700 Salix brachista
SalBow5G4178 Salvia bowleyana
Sc19g0002430 Simmondsia chinensis
Sed0010252 Sechium edule
SEGI_12983 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10734 Striga asiatica
SMO134G0111 Selaginella moellendorffii
SMO137G0070 Selaginella moellendorffii
SMO137G0071 Selaginella moellendorffii
SMO137G0272 Selaginella moellendorffii
SMO266G0067 Selaginella moellendorffii
Solyc12g017510.2 Solanum lycopersicum
Sopen12g008290 Solanum pennellii
Sp4g14240 Schrenkiella parvula
TAR636G3644 Trochodendron aralioides
THA.LOC104800940 Tarenaya hassleriana
Thecc.05G000800 Theobroma cacao
Thhalv10016356m.g Eutrema salsugineum
TPR.G1526 Trifolium pratense
TPR.G9807 Trifolium pratense
TWI63G1373 Tripterygium wilfordii
unitig_22.g5322 Utricularia gibba
vmacro00728 Vaccinium macrocarpon
VMungo0331G0945 Vigna mungo
VMungo0464G0544 Vigna mungo
VMungo0647G0587 Vigna mungo
VMungo0720G2947 Vigna mungo
Zm00001eb120920 Zea mays

User provided reference genes

Program Settings