Gene: AT2G31890
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G31890
- Transcript Identifier AT2G31890.1
- Gene Type Coding gene
- Location Chr2 : 13557100-13559715 : negative
Gene Family Information
- ID HOM05D006787
- #Genes/#Species 119/93
- Phylogenetic origin
- ID ORTHO05D008366
- #Genes/#Species 120/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G31890.1
- uniprot Q8VZE7
Descriptions
- Description RAP
- Computational description RAP; CONTAINS InterPro DOMAIN/s: RAP domain (InterPro:IPR013584); Has 766 Blast hits to 576 proteins in 113 species: Archae - 0; Bacteria - 46; Metazoa - 118; Fungi - 18; Plants - 194; Viruses - 0; Other Eukaryotes - 390 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:1901259 | IEA | GOA Database | chloroplast rRNA processing | |
GO:1901259 | IMP IBA | Gene Ontology | chloroplast rRNA processing | 1 2 |
GO:0006952 | IEA | GOA Database | defense response | |
GO:0006364 | IEA | GOA Database | rRNA processing | |
GO:0000963 | IBA | Gene Ontology | mitochondrial RNA processing | 1 |
GO:0044528 | IBA | Gene Ontology | regulation of mitochondrial mRNA stability | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | GOA Database | RNA binding | |
GO:0003723 | IDA IBA | Gene Ontology | RNA binding | 1 2 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0035770 | IBA | Gene Ontology | ribonucleoprotein granule | 1 |
GO:0009507 | IEA | GOA Database | chloroplast | |
GO:0009507 | IMP IBA | Gene Ontology | chloroplast | 1 2 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0042644 | IEA | GOA Database | chloroplast nucleoid | |
GO:0005759 | IBA | Gene Ontology | mitochondrial matrix | 1 |
GO:0005634 | ISM | Gene Ontology | nucleus | |
GO:0042646 | IDA | Gene Ontology | plastid nucleoid | 2 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR013584 | RAP domain |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |