Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03170 Brassica napus
A07p24380 Brassica napus
A10p05180 Brassica napus
Aa31LG10G13400 Aethionema arabicum
Aa31LG1G7630 Aethionema arabicum
Aa31LG5G5980 Aethionema arabicum
Actinidia11204 Actinidia chinensis
Actinidia32516 Actinidia chinensis
AL1G16560 Arabidopsis lyrata
AL5G40640 Arabidopsis lyrata
Aqoxy4G00148 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M24HCJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea
AT1G06530 Arabidopsis thaliana
AT2G42865 Arabidopsis thaliana
AT3G58840 Arabidopsis thaliana
ATR0568G074 Amborella trichopoda
ATR1152G032 Amborella trichopoda
Atru.chr6.2094 Acer truncatum
BcaB02g06783 Brassica carinata
BcaB02g07495 Brassica carinata
BcaB06g29269 Brassica carinata
BcaC08g44946 Brassica carinata
BolC4t22018H Brassica oleracea
BolC5t29251H Brassica oleracea
BolC6t37739H Brassica oleracea
BolC8t52643H Brassica oleracea
BraA05t19307Z Brassica rapa
BraA07t30085Z Brassica rapa
BraA10t42785Z Brassica rapa
C04p03820 Brassica napus
C05p04790 Brassica napus
C06p25770 Brassica napus
CANSAT64G1891 Cannabis sativa
CARHR006150 Cardamine hirsuta
CARHR169250 Cardamine hirsuta
Carub.0001s0590 Capsella rubella
Carub.0005s2562 Capsella rubella
Ca_06284_v3 Cicer arietinum L.
Cfa021376 Carpinus fangiana
Ciclev10032336m.g Citrus clementina
CiPaw.03G189000 Carya illinoinensis
ClCG02G018390 Citrullus lanatus
Cpa.g.sc50.80 Carica papaya
CsaV3_6G015830 Cucumis sativus L.
CSS0028256 Camellia sinensis var. sinensis
CSS0047125 Camellia sinensis var. sinensis
DCAR_013314 Daucus carota
Dinv07090 Davidia involucrata
Duzib147G0591 Durio zibethinus
Duzib187G1417 Durio zibethinus
Duzib264G0099 Durio zibethinus
Eucgr.A01969 Eucalyptus grandis
FAN02G2853 Fragaria x ananassa
FAN05G2931 Fragaria x ananassa
FAN09G1973 Fragaria x ananassa
FAN14G2666 Fragaria x ananassa
Glyma.02G287000 Glycine max
Glyma.14G027900 Glycine max
Gohir.A05G378800 Gossypium hirsutum
Gohir.A11G224802 Gossypium hirsutum
Gohir.A12G079000 Gossypium hirsutum
Gohir.D04G036800 Gossypium hirsutum
Gohir.D11G228900 Gossypium hirsutum
Gohir.D12G068400 Gossypium hirsutum
Gorai.003G069000 Gossypium raimondii
Gorai.008G098200 Gossypium raimondii
Gorai.012G041600 Gossypium raimondii
Haze_13495 Corylus avellana
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla
Hma1.2p1_1729F.1_g299610 Hydrangea macrophylla
Lalb_Chr05g0211951 Lupinus albus
Lalb_Chr10g0106721 Lupinus albus
Lalb_Chr17g0348301 Lupinus albus
Lj1P620T12 Lonicera japonica
LjContig00310g0014416 Lotus japonicus
Manes.01G127500 Manihot esculenta
Manes.02G084200 Manihot esculenta
MBI07_g07832_MAGBIO Magnolia biondii
MBI10_g42732_MAGBIO Magnolia biondii
MD09G1151900 Malus domestica
MD17G1139500 Malus domestica
Medtr5g091710 Medicago truncatula
MELO3C019688.2 Cucumis melo
Nn3g20927 Nelumbo nucifera
PGR042G2728 Punica granatum
Phvul.008G191300 Phaseolus vulgaris
Potri.002G060200 Populus trichocarpa
Potri.005G201400 Populus trichocarpa
Prupe.3G172600 Prunus persica
Psat2g015800 Pisum sativum
PSO104G0025 Papaver somniferum
PSO541G2000 Papaver somniferum
PSO675G6378 Papaver somniferum
QL08p044083 Quercus lobata
RcHm_v2.0_Chr2g0151481 Rosa chinensis
Rhsim06G0116700 Rhododendron simsii
Sabra02G0048700 Salix brachista
Sed0007746 Sechium edule
Sed0020726 Sechium edule
Sp1g05290 Schrenkiella parvula
Sp4g24990 Schrenkiella parvula
Sp5g04020 Schrenkiella parvula
TAR622G1344 Trochodendron aralioides
TAR627G0303 Trochodendron aralioides
TAR627G0640 Trochodendron aralioides
TAR629G3165 Trochodendron aralioides
THA.LOC104800823 Tarenaya hassleriana
THA.LOC104802276 Tarenaya hassleriana
Thecc.01G161700 Theobroma cacao
Thhalv10006112m.g Eutrema salsugineum
Thhalv10009835m.g Eutrema salsugineum
TPR.G12660 Trifolium pratense
TWI59G0461 Tripterygium wilfordii
vmacro12460 Vaccinium macrocarpon
VMungo0251G3664 Vigna mungo
VMungo0647G1995 Vigna mungo

User provided reference genes

Program Settings