Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G660 Aethionema arabicum
Actinidia03526 Actinidia chinensis
Ah.05g170350 Amaranthus hybridus
AL1G24230 Arabidopsis lyrata
AL1G24400 Arabidopsis lyrata
Aqoxy7G01951 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea
AT1G12790 Arabidopsis thaliana
ATR0083G058 Amborella trichopoda
Atru.chr13.2494 Acer truncatum
Atru.chr13.2506 Acer truncatum
AUR62013379 Chenopodium quinoa
AUR62038532 Chenopodium quinoa
BcaC05g25114 Brassica carinata
CAN.G14.56 Capsicum annuum
CAN.G27.3 Capsicum annuum
CANSAT21G1464 Cannabis sativa
CANSAT21G1945 Cannabis sativa
CARHR013100 Cardamine hirsuta
Carub.0001s1251 Capsella rubella
Ca_26167_v3 Cicer arietinum L.
Cc10_g08640 Coffea canephora
Ciclev10024137m.g Citrus clementina
CiPaw.04G009300 Carya illinoinensis
ClCG11G008450 Citrullus lanatus
COL.COLO4_05203 Corchorus olitorius
COL.COLO4_36659 Corchorus olitorius
Cpa.g.sc21.84 Carica papaya
CsaV3_2G033200 Cucumis sativus L.
CSS0011722 Camellia sinensis var. sinensis
CSS0025148 Camellia sinensis var. sinensis
DCAR_016528 Daucus carota
Dinv22109 Davidia involucrata
Duzib213G0772 Durio zibethinus
ECA247G0072 Erigeron canadensis
EL10Ac1g01267 Beta vulgaris
Eucgr.F04072 Eucalyptus grandis
FAN20G1409 Fragaria x ananassa
FAN20G1527 Fragaria x ananassa
FAN20G2680 Fragaria x ananassa
FAN27G1710 Fragaria x ananassa
FvH4_2g00851 Fragaria vesca
Glyma.11G110500 Glycine max
Glyma.12G014500 Glycine max
Gohir.A05G328400 Gossypium hirsutum
Gohir.D05G329400 Gossypium hirsutum
Gorai.009G352800 Gossypium raimondii
GSVIVG01036291001 Vitis vinifera
HanXRQChr08g0227531 Helianthus annuus
Haze_13956 Corylus avellana
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla
HPP92_021490 Vanilla planifolia
HPP92_021529 Vanilla planifolia
Hund16916 Selenicereus undatus
Lalb_Chr01g0000751 Lupinus albus
Lalb_Chr01g0000761 Lupinus albus
Lj3g0000289 Lotus japonicus
Lj5C630T5 Lonicera japonica
Lj7A235T22 Lonicera japonica
Lj7A241T18 Lonicera japonica
Lj7C240T16 Lonicera japonica
Lsat_1_v5_gn_1_24901 Lactuca sativa
Manes.02G201500 Manihot esculenta
Mapoly0068s0032 Marchantia polymorpha
MBI04_g46123_MAGBIO Magnolia biondii
MD05G1003900 Malus domestica
MD05G1004600 Malus domestica
Medtr2g010410 Medicago truncatula
Medtr2g451120 Medicago truncatula
MELO3C029791.2 Cucumis melo
Migut.C01379 Erythranthe guttata
MSTRG.1598 Avicennia marina
Nitab4.5_0002654g0040 Nicotiana tabacum
Nitab4.5_0010319g0040 Nicotiana tabacum
Nn8g39331 Nelumbo nucifera
Os05g0588200 Oryza sativa ssp. japonica
Peaxi162Scf00818g00536 Petunia axillaris
PGR044G1078 Punica granatum
PGR044G1872 Punica granatum
PGSC0003DMG400033140 Solanum tuberosum
Phvul.011G017400 Phaseolus vulgaris
Potri.001G377100 Populus trichocarpa
Prupe.8G007100 Prunus persica
Psat1g020920 Pisum sativum
PSO170G3180 Papaver somniferum
QL09p001838 Quercus lobata
QL11p001773 Quercus lobata
RcHm_v2.0_Chr6g0251241 Rosa chinensis
RcHm_v2.0_Chr6g0275321 Rosa chinensis
Rhsim08G0116200 Rhododendron simsii
Sabra16G0248400 Salix brachista
SalBow7G2072 Salvia bowleyana
Sc23g0000070 Simmondsia chinensis
Sed0014406 Sechium edule
SGA_v2.0_scaffold147G36299 Striga asiatica
SGA_v2.0_scaffold24G10647 Striga asiatica
SHI16724 Sapria himalayana
SMO119G0513 Selaginella moellendorffii
SMO146G0327 Selaginella moellendorffii
Solyc06g064560.4 Solanum lycopersicum
Sopen06g023040 Solanum pennellii
Sp1g11350 Schrenkiella parvula
TAR625G0361 Trochodendron aralioides
THA.LOC104814608 Tarenaya hassleriana
Thecc.08G178500 Theobroma cacao
Thhalv10008579m.g Eutrema salsugineum
TPR.G29429 Trifolium pratense
TWI12G1402 Tripterygium wilfordii
unitig_32.g11211 Utricularia gibba
vmacro14431 Vaccinium macrocarpon
vmacro17835 Vaccinium macrocarpon
VMungo1127G1290 Vigna mungo
Zm00001eb345090 Zea mays

User provided reference genes

Program Settings