Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p26080 Brassica napus
Aa31LG8G9120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis
Actinidia23525 Actinidia chinensis
Actinidia40137 Actinidia chinensis
Ah.13g071710 Amaranthus hybridus
AL3G36890 Arabidopsis lyrata
Aqoxy2G03421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea
AT3G22590 Arabidopsis thaliana
ATR0665G006 Amborella trichopoda
Atru.chr4.2438 Acer truncatum
AUR62033670 Chenopodium quinoa
AUR62034718 Chenopodium quinoa
BcaB06g26371 Brassica carinata
BcaC05g28033 Brassica carinata
BolC5t32790H Brassica oleracea
BraA05t21491Z Brassica rapa
C05p40480 Brassica napus
CAN.G231.10 Capsicum annuum
CANSAT78G1673 Cannabis sativa
CARHR098480 Cardamine hirsuta
Carub.0003s2274 Capsella rubella
Ca_24424_v3 Cicer arietinum L.
CBR_g48312 Chara braunii
Cc03_g04010 Coffea canephora
CDE05G2168 Ceratophyllum demersum
Ciclev10005124m.g Citrus clementina
CiPaw.01G168400 Carya illinoinensis
ClCG05G005070 Citrullus lanatus
COL.COLO4_21511 Corchorus olitorius
Cpa.g.sc58.86 Carica papaya
Cre02.g104550 Chlamydomonas reinhardtii
CsaV3_3G013130 Cucumis sativus L.
CSS0001912 Camellia sinensis var. sinensis
CSS0011956 Camellia sinensis var. sinensis
DCAR_024171 Daucus carota
Dinv10241 Davidia involucrata
Dinv14009 Davidia involucrata
Dinv44552 Davidia involucrata
Duzib052G0918 Durio zibethinus
ECA246G3355 Erigeron canadensis
EL10Ac3g06489 Beta vulgaris
Eucgr.H03443 Eucalyptus grandis
FAN07G2338 Fragaria x ananassa
FAN12G1590 Fragaria x ananassa
FAN17G0837 Fragaria x ananassa
FAN22G0081 Fragaria x ananassa
FvH4_4g16100 Fragaria vesca
Glyma.11G008100 Glycine max
Gohir.A02G033400 Gossypium hirsutum
Gohir.D02G039900 Gossypium hirsutum
Gorai.005G044200 Gossypium raimondii
GSVIVG01018007001 Vitis vinifera
HanXRQChr11g0327791 Helianthus annuus
HanXRQChr12g0381471 Helianthus annuus
Haze_00870 Corylus avellana
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla
HPP92_018620 Vanilla planifolia
Hund10579 Selenicereus undatus
Lalb_Chr05g0211161 Lupinus albus
Lj3A732T77 Lonicera japonica
LjContig00222g0006058 Lotus japonicus
Lsat_1_v5_gn_6_103081 Lactuca sativa
Manes.15G030400 Manihot esculenta
Mapoly0001s0040 Marchantia polymorpha
MCO02G458 Micromonas commoda
MD09G1133500 Malus domestica
MD13G1132600 Malus domestica
MD13G1196100 Malus domestica
MD16G1196600 Malus domestica
Medtr5g006960 Medicago truncatula
MELO3C006520.2 Cucumis melo
Migut.G00354 Erythranthe guttata
Nitab4.5_0000321g0170 Nicotiana tabacum
Nn1g02367 Nelumbo nucifera
Oeu042804.1 Olea europaea
Oeu042805.1 Olea europaea
Os03g0664700 Oryza sativa ssp. japonica
Peaxi162Scf00131g00127 Petunia axillaris
PGR004G1051 Punica granatum
PGSC0003DMG400016264 Solanum tuberosum
Phvul.002G042300 Phaseolus vulgaris
Potri.008G155000 Populus trichocarpa
Potri.010G085500 Populus trichocarpa
Pp3c6_19770 Physcomitrium patens
PRCOL_00002517 Prasinoderma coloniale
Prupe.1G016800 Prunus persica
Psat2g189880 Pisum sativum
PSO210G5270 Papaver somniferum
PSO761G0513 Papaver somniferum
QL06p001782 Quercus lobata
RcHm_v2.0_Chr4g0415641 Rosa chinensis
Rhsim04G0200900 Rhododendron simsii
Sabra08G0118100 Salix brachista
SalBow2G2000 Salvia bowleyana
Sc13g0004520 Simmondsia chinensis
Sc13g0006070 Simmondsia chinensis
Sed0004090 Sechium edule
Sed0025649 Sechium edule
SEGI_38182 Sequoiadendron giganteum
SGA_v2.0_scaffold191G40505 Striga asiatica
Solyc06g054080.3 Solanum lycopersicum
Sopen06g019240 Solanum pennellii
Sp3g20360 Schrenkiella parvula
TAR365G0539 Trochodendron aralioides
TAR636G0889 Trochodendron aralioides
THA.LOC104808559 Tarenaya hassleriana
Thecc.04G234600 Theobroma cacao
Thhalv10020820m.g Eutrema salsugineum
TPR.G37926 Trifolium pratense
TWI53G1185 Tripterygium wilfordii
unitig_749.g14072 Utricularia gibba
vmacro02845 Vaccinium macrocarpon
VMungo0251G0458 Vigna mungo
VMungo1215G0895 Vigna mungo
Zm00001eb217880 Zea mays

User provided reference genes

Program Settings