Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p38460 Brassica napus
A03p38500 Brassica napus
Aa31LG10G17440 Aethionema arabicum
Aa31LG10G17450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis
Actinidia20680 Actinidia chinensis
Ah.10g029810 Amaranthus hybridus
AL5G46420 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea
AT5G26880 Arabidopsis thaliana
ATR0605G070 Amborella trichopoda
Atru.chr11.2639 Acer truncatum
AUR62009372 Chenopodium quinoa
AUR62023053 Chenopodium quinoa
BcaB01g01017 Brassica carinata
BcaB04g18808 Brassica carinata
BcaC01g03971 Brassica carinata
BolC3t16926H Brassica oleracea
BraA03t12997Z Brassica rapa
C03p46630 Brassica napus
CANSAT01G0516 Cannabis sativa
CARHR291410 Cardamine hirsuta
Carub.0005s3017 Capsella rubella
Ca_26823_v3 Cicer arietinum L.
CBR_g41537 Chara braunii
Cc00_g30670 Coffea canephora
Cc02_g27540 Coffea canephora
Cc02_g28430 Coffea canephora
CDE06G2349 Ceratophyllum demersum
Cfa010738 Carpinus fangiana
Ciclev10032303m.g Citrus clementina
CiPaw.13G002900 Carya illinoinensis
ClCG09G004320 Citrullus lanatus
COL.COLO4_23898 Corchorus olitorius
Cpa.g.sc234.12 Carica papaya
Cpa.g.sc234.13 Carica papaya
Cre10.g417650 Chlamydomonas reinhardtii
CsaV3_7G031240 Cucumis sativus L.
CSS0029691 Camellia sinensis var. sinensis
DCAR_006301 Daucus carota
Dinv09377 Davidia involucrata
Duzib138G0958 Durio zibethinus
ECA236G0509 Erigeron canadensis
ECA248G3327 Erigeron canadensis
EL10Ac2g04310 Beta vulgaris
Eucgr.G03394 Eucalyptus grandis
FAN01G0876 Fragaria x ananassa
FAN01G1843 Fragaria x ananassa
FAN01G1906 Fragaria x ananassa
FAN03G0714 Fragaria x ananassa
FAN06G3601 Fragaria x ananassa
FAN10G4164 Fragaria x ananassa
FvH4_7g00690 Fragaria vesca
Glyma.08G152700 Glycine max
Gohir.A08G145600 Gossypium hirsutum
Gohir.D08G166600 Gossypium hirsutum
Gorai.004G174000 Gossypium raimondii
GSVIVG01032057001 Vitis vinifera
HanXRQChr01g0017301 Helianthus annuus
Haze_03236 Corylus avellana
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla
HPP92_015763 Vanilla planifolia
Hund20080 Selenicereus undatus
Lalb_Chr25g0283211 Lupinus albus
Lj5g0023478 Lotus japonicus
Lj9A629T102 Lonicera japonica
Lsat_1_v5_gn_1_109441 Lactuca sativa
Manes.07G004100 Manihot esculenta
Mapoly0078s0003 Marchantia polymorpha
MBI01_g36432_MAGBIO Magnolia biondii
MBI04_g09488_MAGBIO Magnolia biondii
MBI04_g14259_MAGBIO Magnolia biondii
MCO06G107 Micromonas commoda
MD07G1006600 Malus domestica
Medtr3g027870 Medicago truncatula
MELO3C023534.2 Cucumis melo
Migut.N01481 Erythranthe guttata
Migut.O00562 Erythranthe guttata
MSTRG.5006 Avicennia marina
MSTRG.5008 Avicennia marina
Nitab4.5_0001542g0050 Nicotiana tabacum
Nitab4.5_0011905g0020 Nicotiana tabacum
Nn2g15502 Nelumbo nucifera
Oeu010354.1 Olea europaea
Os08g0506500 Oryza sativa ssp. japonica
Peaxi162Scf00428g00819 Petunia axillaris
PGR031G3323 Punica granatum
PGSC0003DMG400006881 Solanum tuberosum
Phvul.005G036700 Phaseolus vulgaris
Potri.009G064500 Populus trichocarpa
Pp3c23_8130 Physcomitrium patens
Pp3c8_11960 Physcomitrium patens
PRCOL_00005260 Prasinoderma coloniale
Prupe.2G009700 Prunus persica
Psat5g204920 Pisum sativum
PSO339G5555 Papaver somniferum
PSO384G2587 Papaver somniferum
QL04p005221 Quercus lobata
RcHm_v2.0_Chr1g0314911 Rosa chinensis
Rhsim01G0130800 Rhododendron simsii
Sabra09G0047700 Salix brachista
SalBow4G2297 Salvia bowleyana
Sc11g0009300 Simmondsia chinensis
Sed0007518 Sechium edule
SGA_v2.0_scaffold4G02252 Striga asiatica
SMO351G0607 Selaginella moellendorffii
Solyc01g086900.4 Solanum lycopersicum
Sopen01g033910 Solanum pennellii
Sp1g00030 Schrenkiella parvula
Sp5g00020 Schrenkiella parvula
TAR633G0758 Trochodendron aralioides
THA.LOC104801981 Tarenaya hassleriana
Thecc.01G413900 Theobroma cacao
Thhalv10006150m.g Eutrema salsugineum
TPR.G12287 Trifolium pratense
TWI73G0313 Tripterygium wilfordii
unitig_0.g1579 Utricularia gibba
vmacro21178 Vaccinium macrocarpon
VMungo1080G0119 Vigna mungo
Zm00001eb034920 Zea mays

User provided reference genes

Program Settings