Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p03050 Brassica napus
Aa31LG1G20250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis
Actinidia25091 Actinidia chinensis
Actinidia35928 Actinidia chinensis
Ah.04g153440 Amaranthus hybridus
AL1G14300 Arabidopsis lyrata
Aqoxy5G00083 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea
AT1G04620 Arabidopsis thaliana
ATR0787G041 Amborella trichopoda
Atru.chr4.1848 Acer truncatum
AUR62035337 Chenopodium quinoa
AUR62035902 Chenopodium quinoa
AUR62043860 Chenopodium quinoa
BolC5t29064H Brassica oleracea
BraA10t42578Z Brassica rapa
C05p02810 Brassica napus
CAN.G812.44 Capsicum annuum
CANSAT78G1778 Cannabis sativa
CARHR003970 Cardamine hirsuta
Carub.0001s0385 Capsella rubella
Ca_11784_v3 Cicer arietinum L.
Ca_17765_v3 Cicer arietinum L.
CBR_g51515 Chara braunii
Cc03_g06790 Coffea canephora
Cc03_g07000 Coffea canephora
CDE09G0604 Ceratophyllum demersum
Cfa014839 Carpinus fangiana
Ciclev10004924m.g Citrus clementina
CiPaw.02G103900 Carya illinoinensis
ClCG05G003790 Citrullus lanatus
COL.COLO4_07239 Corchorus olitorius
COL.COLO4_34324 Corchorus olitorius
Cpa.g.sc59.55 Carica papaya
Cre11.g468700 Chlamydomonas reinhardtii
CsaV3_3G011480 Cucumis sativus L.
CSS0026751 Camellia sinensis var. sinensis
DCAR_002286 Daucus carota
Dinv29777 Davidia involucrata
Duzib151G1212 Durio zibethinus
ECA233G0386 Erigeron canadensis
EL10Ac3g06742 Beta vulgaris
Eucgr.H00112 Eucalyptus grandis
FAN07G1877 Fragaria x ananassa
FAN12G0711 Fragaria x ananassa
FAN17G2880 Fragaria x ananassa
FAN22G0814 Fragaria x ananassa
FvH4_4g05310 Fragaria vesca
Glyma.10G128400 Glycine max
Glyma.20G079901 Glycine max
Gohir.A10G119800 Gossypium hirsutum
Gohir.D10G146800 Gossypium hirsutum
Gorai.011G164100 Gossypium raimondii
GSVIVG01028992001 Vitis vinifera
HanXRQChr07g0185841 Helianthus annuus
Haze_11525 Corylus avellana
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla
HPP92_009009 Vanilla planifolia
Hund19263 Selenicereus undatus
Lalb_Chr01g0011271 Lupinus albus
Lj3A630T51 Lonicera japonica
Lj6g0024353 Lotus japonicus
Lsat_1_v5_gn_6_61660 Lactuca sativa
Manes.15G048100 Manihot esculenta
Mapoly0088s0008 Marchantia polymorpha
MBI07_g21064_MAGBIO Magnolia biondii
MBI11_g39495_MAGBIO Magnolia biondii
MBI12_g00604_MAGBIO Magnolia biondii
MBI13_g46182_MAGBIO Magnolia biondii
MBI15_g44046_MAGBIO Magnolia biondii
MCO15G577 Micromonas commoda
MD13G1227100 Malus domestica
Medtr1g046250 Medicago truncatula
MELO3C006358.2 Cucumis melo
MELO3C028457.2 Cucumis melo
Migut.G00599 Erythranthe guttata
Nitab4.5_0000451g0130 Nicotiana tabacum
Nitab4.5_0003287g0030 Nicotiana tabacum
Nn1g03061 Nelumbo nucifera
Oeu024839.2 Olea europaea
Os04g0320100 Oryza sativa ssp. japonica
Peaxi162Scf00125g00710 Petunia axillaris
PGR142G1067 Punica granatum
PGSC0003DMG401011586 Solanum tuberosum
Phvul.007G238800 Phaseolus vulgaris
Potri.010G062300 Populus trichocarpa
Pp3c2_21860 Physcomitrium patens
PRCOL_00000047 Prasinoderma coloniale
Prupe.1G054400 Prunus persica
Prupe.1G054600 Prunus persica
Psat6g109520 Pisum sativum
PSO764G0126 Papaver somniferum
PSO832G4215 Papaver somniferum
QL06p022330 Quercus lobata
RcHm_v2.0_Chr4g0396281 Rosa chinensis
Rhsim09G0044600 Rhododendron simsii
Sabra10G0044300 Salix brachista
SalBow2G2385 Salvia bowleyana
Sc25g0004890 Simmondsia chinensis
Sed0017900 Sechium edule
SEGI_09547 Sequoiadendron giganteum
SEGI_19589 Sequoiadendron giganteum
SEGI_36405 Sequoiadendron giganteum
SGA_v2.0_scaffold57G20185 Striga asiatica
Solyc09g091100.4 Solanum lycopersicum
Sopen09g034080 Solanum pennellii
Sp1g03450 Schrenkiella parvula
SpUn0217_0010 Schrenkiella parvula
TAR365G0583 Trochodendron aralioides
THA.LOC104801056 Tarenaya hassleriana
Thecc.04G218300 Theobroma cacao
Thhalv10007576m.g Eutrema salsugineum
TPR.G24008 Trifolium pratense
TWI53G1958 Tripterygium wilfordii
unitig_899.g14858 Utricularia gibba
vmacro00524 Vaccinium macrocarpon
VMungo0720G1672 Vigna mungo
Zm00001eb038650 Zea mays

User provided reference genes

Program Settings