Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p29160 Brassica napus
Aa31LG5G23660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4222 Anthoceros agrestis
Actinidia29135 Actinidia chinensis
Ah.09g227670 Amaranthus hybridus
AL4G35050 Arabidopsis lyrata
Aqoxy7G01420 Aquilegia oxysepala
AT2G38050 Arabidopsis thaliana
ATR0582G138 Amborella trichopoda
ATR0618G398 Amborella trichopoda
Atru.chr7.292 Acer truncatum
Atru.chr8.2182 Acer truncatum
AUR62011054 Chenopodium quinoa
AUR62033432 Chenopodium quinoa
BcaC02g12917 Brassica carinata
BcaC02g12928 Brassica carinata
BolC4t28142H Brassica oleracea
BraA04t18385Z Brassica rapa
C04p66370 Brassica napus
CAN.G1195.8 Capsicum annuum
CAN.G1195.9 Capsicum annuum
CAN.G284.7 Capsicum annuum
CANSAT35G1770 Cannabis sativa
CARHR132620 Cardamine hirsuta
Carub.0004s2002 Capsella rubella
Ca_23721_v3 Cicer arietinum L.
Cc06_g01710 Coffea canephora
CDE04G3256 Ceratophyllum demersum
Cfa017259 Carpinus fangiana
Ciclev10013348m.g Citrus clementina
CiPaw.09G205500 Carya illinoinensis
ClCG10G021810 Citrullus lanatus
COL.COLO4_14612 Corchorus olitorius
COL.COLO4_14613 Corchorus olitorius
Cpa.g.sc56.108 Carica papaya
Cre12.g528550 Chlamydomonas reinhardtii
Cre14.g627950 Chlamydomonas reinhardtii
CsaV3_3G034190 Cucumis sativus L.
CSS0045140 Camellia sinensis var. sinensis
DCAR_015459 Daucus carota
Duzib128G1357 Durio zibethinus
ECA248G0524 Erigeron canadensis
Eucgr.D02079 Eucalyptus grandis
FAN02G3588 Fragaria x ananassa
FAN05G5656 Fragaria x ananassa
FAN09G0328 Fragaria x ananassa
FAN23G2586 Fragaria x ananassa
FvH4_6g12130 Fragaria vesca
Glyma.07G144400 Glycine max
Glyma.11G010000 Glycine max
Gohir.A04G088000 Gossypium hirsutum
Gohir.D04G128400 Gossypium hirsutum
Gorai.012G111500 Gossypium raimondii
GSVIVG01034016001 Vitis vinifera
HanXRQChr12g0376101 Helianthus annuus
Haze_20943 Corylus avellana
Hma1.2p1_0915F.1_g236410 Hydrangea macrophylla
HPP92_018606 Vanilla planifolia
Lalb_Chr19g0124781 Lupinus albus
Lj1g0013091 Lotus japonicus
Lj3P942T23 Lonicera japonica
Lsat_1_v5_gn_5_155401 Lactuca sativa
Manes.08G087200 Manihot esculenta
Mapoly0170s0018 Marchantia polymorpha
MBI05_g03439_MAGBIO Magnolia biondii
MCO03G255 Micromonas commoda
MD04G1146500 Malus domestica
MD12G1159700 Malus domestica
Medtr4g064025 Medicago truncatula
Medtr7g066760 Medicago truncatula
MELO3C009194.2 Cucumis melo
Migut.J00229 Erythranthe guttata
MSTRG.19034 Avicennia marina
Nitab4.5_0000008g0640 Nicotiana tabacum
Nitab4.5_0000349g0270 Nicotiana tabacum
Nitab4.5_0001911g0020 Nicotiana tabacum
Nitab4.5_0004827g0020 Nicotiana tabacum
Nn2g13597 Nelumbo nucifera
Oeu040800.1 Olea europaea
Os01g0851600 Oryza sativa ssp. japonica
Os11g0184100 Oryza sativa ssp. japonica
Peaxi162Scf00330g00031 Petunia axillaris
Peaxi162Scf00330g00043 Petunia axillaris
PGR031G1704 Punica granatum
PGSC0003DMG400019202 Solanum tuberosum
PGSC0003DMG400020353 Solanum tuberosum
Phvul.008G108600 Phaseolus vulgaris
Potri.005G047800 Populus trichocarpa
Potri.013G134433 Populus trichocarpa
Potri.016G110600 Populus trichocarpa
Pp3c6_28890 Physcomitrium patens
PRCOL_00004633 Prasinoderma coloniale
Prupe.6G270300 Prunus persica
Psat0s1978g0160 Pisum sativum
PSO063G7329 Papaver somniferum
PSO832G1405 Papaver somniferum
RcHm_v2.0_Chr3g0463931 Rosa chinensis
Rhsim05G0205400 Rhododendron simsii
Sabra13G0114200 Salix brachista
Sabra16G0107200 Salix brachista
SalBow4G0305 Salvia bowleyana
Sc07g0006860 Simmondsia chinensis
Sed0009010 Sechium edule
SEGI_31326 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26768 Striga asiatica
SHI12779 Sapria himalayana
SMO196G0183 Selaginella moellendorffii
SMO244G0091 Selaginella moellendorffii
Solyc09g013070.3 Solanum lycopersicum
Solyc10g086500.1 Solanum lycopersicum
Sopen09g006910 Solanum pennellii
Sopen10g035880 Solanum pennellii
Sp4g20370 Schrenkiella parvula
TAR623G0072 Trochodendron aralioides
THA.LOC104806524 Tarenaya hassleriana
Thecc.05G022900 Theobroma cacao
Thhalv10017092m.g Eutrema salsugineum
TPR.G10863 Trifolium pratense
TWI53G2038 Tripterygium wilfordii
unitig_27.g24814 Utricularia gibba
VMungo1383G1434 Vigna mungo

User provided reference genes

Program Settings