Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p05030 Brassica napus
Aa31LG1G26470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1945 Anthoceros agrestis
Actinidia02925 Actinidia chinensis
Ah.16g102590 Amaranthus hybridus
AL4G44020 Arabidopsis lyrata
Aqoxy2G02333 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea
AT2G44920 Arabidopsis thaliana
ATR0040G001 Amborella trichopoda
ATR0559G079 Amborella trichopoda
Atru.BG.275.p Acer truncatum
AUR62012132 Chenopodium quinoa
AUR62040704 Chenopodium quinoa
BcaB02g08862 Brassica carinata
BcaC02g12262 Brassica carinata
BolC4t22217H Brassica oleracea
BraA05t19477Z Brassica rapa
C04p05870 Brassica napus
CAN.G394.84 Capsicum annuum
CANSAT56G0196 Cannabis sativa
CARHR140160 Cardamine hirsuta
Carub.0004s2751 Capsella rubella
Ca_08185_v3 Cicer arietinum L.
CBR_g37590 Chara braunii
Cc01_g04360 Coffea canephora
Cc02_g07470 Coffea canephora
CDE02G3683 Ceratophyllum demersum
CDE09G0303 Ceratophyllum demersum
Ciclev10032666m.g Citrus clementina
CiPaw.02G186200 Carya illinoinensis
ClCG11G006700 Citrullus lanatus
COL.COLO4_25481 Corchorus olitorius
Cpa.g.sc19.283 Carica papaya
Cre16.g687300 Chlamydomonas reinhardtii
CsaV3_6G001320 Cucumis sativus L.
CSS0025701 Camellia sinensis var. sinensis
DCAR_011727 Daucus carota
Dinv03373 Davidia involucrata
Dinv03376 Davidia involucrata
Dinv06756 Davidia involucrata
Dinv06757 Davidia involucrata
Duzib106G0051 Durio zibethinus
ECA233G2444 Erigeron canadensis
EL10Ac2g04706 Beta vulgaris
Eucgr.G02956 Eucalyptus grandis
FAN01G0046 Fragaria x ananassa
FAN01G2186 Fragaria x ananassa
FAN03G2768 Fragaria x ananassa
FAN06G3081 Fragaria x ananassa
FAN06G4444 Fragaria x ananassa
FvH4_7g23000 Fragaria vesca
Glyma.11G222100 Glycine max
Glyma.18G035300 Glycine max
Gohir.A10G222000 Gossypium hirsutum
Gohir.D10G234300 Gossypium hirsutum
Gorai.011G267900 Gossypium raimondii
GSVIVG01016495001 Vitis vinifera
HanXRQChr08g0221071 Helianthus annuus
Haze_17112 Corylus avellana
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla
HPP92_019456 Vanilla planifolia
Hund13792 Selenicereus undatus
Hund16063 Selenicereus undatus
Lalb_Chr18g0053081 Lupinus albus
Lj6g0021847 Lotus japonicus
Lj8C79T16 Lonicera japonica
Lsat_1_v5_gn_3_6781 Lactuca sativa
Lsat_1_v5_gn_8_14921 Lactuca sativa
Manes.07G118800 Manihot esculenta
Mapoly0057s0063 Marchantia polymorpha
MBI05_g35187_MAGBIO Magnolia biondii
MD07G1203100 Malus domestica
Medtr3g068150 Medicago truncatula
MELO3C008233.2 Cucumis melo
Migut.F00754 Erythranthe guttata
MSTRG.27369 Avicennia marina
Nitab4.5_0000120g0080 Nicotiana tabacum
Nitab4.5_0002872g0060 Nicotiana tabacum
Nn2g13462 Nelumbo nucifera
Oeu001504.1 Olea europaea
Oeu031356.1 Olea europaea
Os01g0144100 Oryza sativa ssp. japonica
Peaxi162Scf00736g00213 Petunia axillaris
PGR142G0607 Punica granatum
PGSC0003DMG400034939 Solanum tuberosum
Phvul.001G235600 Phaseolus vulgaris
Potri.008G058800 Populus trichocarpa
Potri.010G200000 Populus trichocarpa
Pp3c11_10480 Physcomitrium patens
Pp3c2_27910 Physcomitrium patens
PRCOL_00006589 Prasinoderma coloniale
Prupe.2G239300 Prunus persica
Psat5g124720 Pisum sativum
PSO339G4488 Papaver somniferum
PSO513G0127 Papaver somniferum
QL08p061156 Quercus lobata
RcHm_v2.0_Chr1g0368241 Rosa chinensis
Rhsim03G0134500 Rhododendron simsii
Sabra10G0154200 Salix brachista
Sc14g0004650 Simmondsia chinensis
Sed0013536 Sechium edule
SEGI_08946 Sequoiadendron giganteum
SEGI_09593 Sequoiadendron giganteum
SGA_v2.0_scaffold389G50578 Striga asiatica
SMO364G0932 Selaginella moellendorffii
Sopen06g032890 Solanum pennellii
Sp4g26990 Schrenkiella parvula
TAR636G1277 Trochodendron aralioides
THA.LOC104810044 Tarenaya hassleriana
Thecc.10G038800 Theobroma cacao
Thhalv10001625m.g Eutrema salsugineum
TPR.G2861 Trifolium pratense
TWI15G0193 Tripterygium wilfordii
unitig_747.g21792 Utricularia gibba
vmacro07051 Vaccinium macrocarpon
VMungo1383G1515 Vigna mungo
Zm00001eb335810 Zea mays

User provided reference genes

Program Settings