Gene: AT2G44920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G44920
  • Transcript Identifier AT2G44920.2
  • Gene Type Coding gene
  • Location Chr2 : 18524419-18526502 : positive

Gene Family Information

  • ID HOM05D006605
  • #Genes/#Species 121/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G44920.2
  • uniprot O22160

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein (TAIR:AT5G55000.1); Has 14558 Blast hits to 5841 proteins in 857 species: Archae - 260; Bacteria - 11175; Metazoa - 170; Fungi - 0; Plants - 186; Viruses - 55; Other Eukaryotes - 2712 (source: NCBI BLink).
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentapeptide repeat (InterPro:IPR001646); BEST Arabidopsis thaliana protein match is: Pentapeptide repeat-containing protein (TAIR:AT1G12250.1); Has 15593 Blast hits to 6460 proteins in 916 species: Archae - 263; Bacteria - 11679; Metazoa - 260; Fungi - 2; Plants - 261; Viruses - 44; Other Eukaryotes - 3084 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol2
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid3
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
Gene Ontologychloroplast4
GO:0009536
IEA
GOA Databaseplastid
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
IBA
Gene Ontologychloroplast thylakoid5 6
GO:0009535
IDA
GOA Databasechloroplast thylakoid membrane
GO:0009535
HDA
Gene Ontologychloroplast thylakoid membrane7
GO:0031977
IDA
GOA Databasethylakoid lumen
GO:0031977
HDA
Gene Ontologythylakoid lumen8
GO:0009543
IEA
GOA Databasechloroplast thylakoid lumen
GO:0009543
IDA, HDA
Gene Ontologychloroplast thylakoid lumen8
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001646 Pentapeptide repeat
IPR044213 Thylakoid lumenal 15kDa protein 1-like
Mapman id Description
35.1 not assigned.annotated