Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12510 Brassica napus
Aa31LG9G16360 Aethionema arabicum
Actinidia36373 Actinidia chinensis
Actinidia37171 Actinidia chinensis
Actinidia37172 Actinidia chinensis
AL7G50500 Arabidopsis lyrata
Aqoxy3G00058 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B6CCGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VDX6J0 Arachis hypogaea
AT5G39790 Arabidopsis thaliana
ATR0681G203 Amborella trichopoda
Atru.chr1.1860 Acer truncatum
Atru.chr1.1862 Acer truncatum
AUR62018202 Chenopodium quinoa
AUR62038689 Chenopodium quinoa
BcaB06g27377 Brassica carinata
BolC4t26210H Brassica oleracea
BraA04t16911Z Brassica rapa
C04p46260 Brassica napus
CAN.G1061.39 Capsicum annuum
CANSAT78G2380 Cannabis sativa
CARHR262440 Cardamine hirsuta
Carub.0007s3596 Capsella rubella
Ca_08157_v3 Cicer arietinum L.
CBR_g3895 Chara braunii
CBR_g3898 Chara braunii
Cc07_g08000 Coffea canephora
CDE04G0866 Ceratophyllum demersum
CDE06G1942 Ceratophyllum demersum
Cfa007827 Carpinus fangiana
Ciclev10012334m.g Citrus clementina
CiPaw.03G070700 Carya illinoinensis
ClCG05G011250 Citrullus lanatus
COL.COLO4_00245 Corchorus olitorius
Cpa.g.sc116.41 Carica papaya
Cre09.g387100 Chlamydomonas reinhardtii
CsaV3_3G021180 Cucumis sativus L.
CSS0036940 Camellia sinensis var. sinensis
DCAR_010755 Daucus carota
Dinv28218 Davidia involucrata
Duzib133G0875 Durio zibethinus
ECA232G4064 Erigeron canadensis
EL10Ac2g03151 Beta vulgaris
Eucgr.J01591 Eucalyptus grandis
FAN01G1326 Fragaria x ananassa
FAN03G1163 Fragaria x ananassa
FAN06G5124 Fragaria x ananassa
FAN10G4184 Fragaria x ananassa
FvH4_7g02800 Fragaria vesca
Glyma.11G216800 Glycine max
Glyma.18G039800 Glycine max
Gohir.A07G078800 Gossypium hirsutum
Gohir.D07G083900 Gossypium hirsutum
Gorai.001G089500 Gossypium raimondii
GSVIVG01030813001 Vitis vinifera
HanXRQChr09g0262181 Helianthus annuus
Haze_14242 Corylus avellana
Haze_14245 Corylus avellana
Hma1.2p1_2448F.1_g322330 Hydrangea macrophylla
Hma1.2p1_2448F.1_g322335 Hydrangea macrophylla
HPP92_003922 Vanilla planifolia
Hund15551 Selenicereus undatus
Lalb_Chr18g0053401 Lupinus albus
Lj2A430G17 Lonicera japonica
Lj6g0007596 Lotus japonicus
Lsat_1_v5_gn_4_157700 Lactuca sativa
Manes.02G075700 Manihot esculenta
Mapoly0074s0064 Marchantia polymorpha
MCO01G130 Micromonas commoda
MD02G1289900 Malus domestica
MD07G1037100 Malus domestica
Medtr3g065930 Medicago truncatula
MELO3C020256.2 Cucumis melo
Migut.L00454 Erythranthe guttata
Migut.L00456 Erythranthe guttata
MSTRG.15326 Avicennia marina
Nitab4.5_0004472g0030 Nicotiana tabacum
Nitab4.5_0011641g0010 Nicotiana tabacum
Nn4g24232 Nelumbo nucifera
Oeu050986.2 Olea europaea
Os02g0135900 Oryza sativa ssp. japonica
Peaxi162Scf01159g00228 Petunia axillaris
PGR042G1892 Punica granatum
PGSC0003DMG400030609 Solanum tuberosum
Phvul.001G230700 Phaseolus vulgaris
Potri.017G125400 Populus trichocarpa
Pp3c14_11030 Physcomitrium patens
Pp3c1_28320 Physcomitrium patens
PRCOL_00002406 Prasinoderma coloniale
Prupe.7G052900 Prunus persica
Psat5g122160 Pisum sativum
PSO017G3284 Papaver somniferum
PSO478G0171 Papaver somniferum
QL02p057713 Quercus lobata
RcHm_v2.0_Chr1g0322821 Rosa chinensis
RcHm_v2.0_Chr1g0323231 Rosa chinensis
Rhsim10G0080600 Rhododendron simsii
Sabra17G0105600 Salix brachista
SalBow7G2937 Salvia bowleyana
Sc14g0006400 Simmondsia chinensis
Sed0021212 Sechium edule
SEGI_39726 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06385 Striga asiatica
Solyc02g091530.4 Solanum lycopersicum
Sopen02g036150 Solanum pennellii
SpUn0356_0010 Schrenkiella parvula
SpUn0419_0020 Schrenkiella parvula
SpUn1104_0010 Schrenkiella parvula
TAR374G1305 Trochodendron aralioides
THA.LOC104805614 Tarenaya hassleriana
Thecc.04G117800 Theobroma cacao
Thhalv10027873m.g Eutrema salsugineum
TPR.G14059 Trifolium pratense
TWI53G1911 Tripterygium wilfordii
unitig_32.g11880 Utricularia gibba
vmacro05527 Vaccinium macrocarpon
vmacro22382 Vaccinium macrocarpon
vmacro23322 Vaccinium macrocarpon
VMungo1383G0070 Vigna mungo
VMungo1383G1559 Vigna mungo
Zm00001eb231700 Zea mays

User provided reference genes

Program Settings