Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G12640 Aethionema arabicum
Actinidia34305 Actinidia chinensis
Ah.04g156530 Amaranthus hybridus
AL6G27960 Arabidopsis lyrata
Aqoxy3G02101 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea
ATR0829G094 Amborella trichopoda
Atru.chr1.2781 Acer truncatum
AUR62002060 Chenopodium quinoa
AUR62028174 Chenopodium quinoa
CAN.G473.117 Capsicum annuum
CANSAT56G1022 Cannabis sativa
CANSAT56G3916 Cannabis sativa
CARHR196200 Cardamine hirsuta
Ca_24442_v3 Cicer arietinum L.
CBR_g24301 Chara braunii
Cc02_g00290 Coffea canephora
CDE11G1068 Ceratophyllum demersum
Cfa006012 Carpinus fangiana
Ciclev10020455m.g Citrus clementina
CiPaw.06G033000 Carya illinoinensis
ClCG05G007010 Citrullus lanatus
COL.COLO4_35796 Corchorus olitorius
Cpa.g.sc39.72 Carica papaya
CsaV3_3G015700 Cucumis sativus L.
CSS0012834 Camellia sinensis var. sinensis
DCAR_009009 Daucus carota
Dinv17259 Davidia involucrata
Duzib264G0907 Durio zibethinus
ECA232G2080 Erigeron canadensis
EL10Ac3g05080 Beta vulgaris
Eucgr.K00088 Eucalyptus grandis
FAN01G0029 Fragaria x ananassa
FAN03G0602 Fragaria x ananassa
FAN10G3989 Fragaria x ananassa
FvH4_7g33920 Fragaria vesca
Glyma.01G228300 Glycine max
Glyma.11G011100 Glycine max
Gohir.A09G004900 Gossypium hirsutum
Gohir.D09G004200 Gossypium hirsutum
Gorai.006G005800 Gossypium raimondii
GSVIVG01024411001 Vitis vinifera
HanXRQChr05g0141721 Helianthus annuus
Haze_04836 Corylus avellana
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla
HPP92_005432 Vanilla planifolia
HPP92_005443 Vanilla planifolia
Hund09790 Selenicereus undatus
Lalb_Chr09g0320221 Lupinus albus
Lj3A887G72 Lonicera japonica
Lj6g0021866 Lotus japonicus
LjContig00222g0024674 Lotus japonicus
Lsat_1_v5_gn_5_182161 Lactuca sativa
Lsat_1_v5_gn_9_47461 Lactuca sativa
Manes.09G124800 Manihot esculenta
Mapoly0015s0191 Marchantia polymorpha
MBI04_g36026_MAGBIO Magnolia biondii
MBI06_g38701_MAGBIO Magnolia biondii
MBI06_g38702_MAGBIO Magnolia biondii
MBI12_g01582_MAGBIO Magnolia biondii
MD07G1308500 Malus domestica
Medtr5g007700 Medicago truncatula
Medtr5g061700 Medicago truncatula
MELO3C006767.2 Cucumis melo
Migut.F00098 Erythranthe guttata
MSTRG.8576 Avicennia marina
Nitab4.5_0001510g0030 Nicotiana tabacum
Nitab4.5_0005342g0010 Nicotiana tabacum
Nn1g01934 Nelumbo nucifera
Oeu060384.1 Olea europaea
Os06g0114600 Oryza sativa ssp. japonica
Peaxi162Scf00133g00721 Petunia axillaris
PGR142G1840 Punica granatum
PGSC0003DMG400020249 Solanum tuberosum
Phvul.002G039600 Phaseolus vulgaris
Potri.013G082000 Populus trichocarpa
Pp3c15_5730 Physcomitrium patens
Prupe.2G325700 Prunus persica
Psat0s2301g0040 Pisum sativum
Psat2g075360 Pisum sativum
Psat2g188880 Pisum sativum
PSO063G2320 Papaver somniferum
PSO782G0079 Papaver somniferum
QL09p024067 Quercus lobata
QL09p024429 Quercus lobata
RcHm_v2.0_Chr1g0384131 Rosa chinensis
Rhsim01G0193300 Rhododendron simsii
Rhsim03G0221300 Rhododendron simsii
Rhsim12G0119200 Rhododendron simsii
Sabra06G0125800 Salix brachista
Sabra13G0070900 Salix brachista
SalBow4G1971 Salvia bowleyana
SalBow4G2334 Salvia bowleyana
Sc06g0002540 Simmondsia chinensis
Sed0002742 Sechium edule
SEGI_03149 Sequoiadendron giganteum
SEGI_31434 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08508 Striga asiatica
SMO340G0278 Selaginella moellendorffii
Solyc02g094260.1 Solanum lycopersicum
Sopen02g038900 Solanum pennellii
TAR374G0999 Trochodendron aralioides
THA.LOC104820882 Tarenaya hassleriana
Thecc.01G135900 Theobroma cacao
TPR.G22023 Trifolium pratense
TPR.G37965 Trifolium pratense
unitig_0.g2430 Utricularia gibba
vmacro06509 Vaccinium macrocarpon
VMungo1215G1087 Vigna mungo
Zm00001eb268960 Zea mays

User provided reference genes

Program Settings