Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09890 Brassica napus
Aa31LG5G12080 Aethionema arabicum
Actinidia05076 Actinidia chinensis
Actinidia05077 Actinidia chinensis
Actinidia26683 Actinidia chinensis
Actinidia32260 Actinidia chinensis
Actinidia32261 Actinidia chinensis
Ah.06g182620 Amaranthus hybridus
AL8G30600 Arabidopsis lyrata
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea
AT5G55100 Arabidopsis thaliana
ATR0585G019 Amborella trichopoda
Atru.chr2.3489 Acer truncatum
AUR62015819 Chenopodium quinoa
AUR62020400 Chenopodium quinoa
BcaB05g22180 Brassica carinata
BcaB08g35874 Brassica carinata
BcaC01g06346 Brassica carinata
BcaC03g14267 Brassica carinata
BcaC04g20270 Brassica carinata
BolC2t07744H Brassica oleracea
BraA02t06053Z Brassica rapa
C02p16450 Brassica napus
C09p45890 Brassica napus
CAN.G492.3 Capsicum annuum
CANSAT11G0281 Cannabis sativa
CANSAT56G4300 Cannabis sativa
CARHR268440 Cardamine hirsuta
Carub.0008s1539 Capsella rubella
Ca_06341_v3 Cicer arietinum L.
Cc05_g14000 Coffea canephora
Cc05_g14010 Coffea canephora
CDE04G1000 Ceratophyllum demersum
Ciclev10007420m.g Citrus clementina
CiPaw.12G131800 Carya illinoinensis
COL.COLO4_09692 Corchorus olitorius
Cpa.g.c37452 Carica papaya
Cpa.g.sc12.276 Carica papaya
Cre11.g481700 Chlamydomonas reinhardtii
CSS0043474 Camellia sinensis var. sinensis
CSS0048002 Camellia sinensis var. sinensis
DCAR_022584 Daucus carota
Dinv40780 Davidia involucrata
Duzib170G0430 Durio zibethinus
Duzib213G0172 Durio zibethinus
ECA236G0056 Erigeron canadensis
EL10Ac4g07766 Beta vulgaris
Eucgr.F00737 Eucalyptus grandis
Eucgr.F00738 Eucalyptus grandis
FAN11G0896 Fragaria x ananassa
FAN16G2871 Fragaria x ananassa
FAN21G3399 Fragaria x ananassa
FAN25G1139 Fragaria x ananassa
FAN25G2516 Fragaria x ananassa
FvH4_2g00353 Fragaria vesca
FvH4_3g23160 Fragaria vesca
Glyma.02G293200 Glycine max
Glyma.14G021200 Glycine max
Gohir.A04G013500 Gossypium hirsutum
Gohir.D05G372700 Gossypium hirsutum
Gorai.009G441100 Gossypium raimondii
GSVIVG01037687001 Vitis vinifera
GSVIVG01037689001 Vitis vinifera
HanXRQChr11g0335921 Helianthus annuus
HanXRQChr11g0335931 Helianthus annuus
Haze_09710 Corylus avellana
HPP92_009832 Vanilla planifolia
Hund23227 Selenicereus undatus
Lalb_Chr17g0348641 Lupinus albus
Lalb_Chr17g0348651 Lupinus albus
Lj1C877G6 Lonicera japonica
LjContig00272g0012578 Lotus japonicus
Lsat_1_v5_gn_7_111120 Lactuca sativa
Manes.03G133700 Manihot esculenta
Mapoly0045s0119 Marchantia polymorpha
MBI07_g09094_MAGBIO Magnolia biondii
MBI07_g37843_MAGBIO Magnolia biondii
MD11G1213100 Malus domestica
MD11G1213200 Malus domestica
Medtr5g093560 Medicago truncatula
Migut.H01809 Erythranthe guttata
Nitab4.5_0001393g0060 Nicotiana tabacum
Nitab4.5_0004829g0090 Nicotiana tabacum
Nn1g07218 Nelumbo nucifera
Nn6g32350 Nelumbo nucifera
Oeu024915.1 Olea europaea
Oeu041836.1 Olea europaea
Os01g0698100 Oryza sativa ssp. japonica
Peaxi162Scf01615g00010 Petunia axillaris
PGR083G0988 Punica granatum
PGSC0003DMG400014387 Solanum tuberosum
Phvul.008G270300 Phaseolus vulgaris
Potri.001G356800 Populus trichocarpa
Prupe.4G218000 Prunus persica
Psat2g014000 Pisum sativum
PSO541G1419 Papaver somniferum
PSO675G4144 Papaver somniferum
QL08p009130 Quercus lobata
QL08p009135 Quercus lobata
RcHm_v2.0_Chr5g0040811 Rosa chinensis
Rhsim06G0220200 Rhododendron simsii
Sabra16G0234800 Salix brachista
Sc03g0008470 Simmondsia chinensis
SEGI_25925 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39010 Striga asiatica
SHI26585 Sapria himalayana
Solyc10g006250.3 Solanum lycopersicum
Solyc10g006260.3 Solanum lycopersicum
Sopen10g002210 Solanum pennellii
Sp6g17030 Schrenkiella parvula
TAR626G0449 Trochodendron aralioides
THA.LOC104811621 Tarenaya hassleriana
Thecc.07G032200 Theobroma cacao
Thhalv10015403m.g Eutrema salsugineum
TPR.G1164 Trifolium pratense
TWI39G1152 Tripterygium wilfordii
unitig_899.g15285 Utricularia gibba
vmacro02216 Vaccinium macrocarpon
VMungo0647G0540 Vigna mungo
Zm00001eb155750 Zea mays
Zm00001eb360910 Zea mays

User provided reference genes

Program Settings