Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p25490 Brassica napus
A09p34460 Brassica napus
A09p34510 Brassica napus
Aa31LG2G14220 Aethionema arabicum
Actinidia01261 Actinidia chinensis
Actinidia32777 Actinidia chinensis
Ah.03g147810 Amaranthus hybridus
AL1G45900 Arabidopsis lyrata
AL5G22520 Arabidopsis lyrata
Aqoxy1G02002 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.P5KSQZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VH9XRT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XVHH14 Arachis hypogaea
AT1G31817 Arabidopsis thaliana
Atru.chr5.2699 Acer truncatum
AUR62014209 Chenopodium quinoa
AUR62038510 Chenopodium quinoa
BcaB03g13787 Brassica carinata
BcaB07g32834 Brassica carinata
BcaC05g27199 Brassica carinata
BolC5t31830H Brassica oleracea
BolC5t32703H Brassica oleracea
BolSC83t61262H Brassica oleracea
BraA05t21433Z Brassica rapa
BraA09t38992Z Brassica rapa
C05p31050 Brassica napus
C05p39630 Brassica napus
CAN.G601.5 Capsicum annuum
CAN.G900.13 Capsicum annuum
CAN.G900.14 Capsicum annuum
CANSAT01G1182 Cannabis sativa
CARHR031150 Cardamine hirsuta
Carub.0001s3014 Capsella rubella
Ca_04162_v3 Cicer arietinum L.
Cc11_g05460 Coffea canephora
CDE02G2054 Ceratophyllum demersum
Cfa016168 Carpinus fangiana
Ciclev10016360m.g Citrus clementina
CiPaw.05G198000 Carya illinoinensis
ClCG10G009230 Citrullus lanatus
COL.COLO4_03796 Corchorus olitorius
Cpa.g.sc48.17 Carica papaya
CsaV3_4G009410 Cucumis sativus L.
CSS0001335 Camellia sinensis var. sinensis
CSS0016706 Camellia sinensis var. sinensis
CSS0032447 Camellia sinensis var. sinensis
CSS0043282 Camellia sinensis var. sinensis
CSS0048860 Camellia sinensis var. sinensis
DCAR_004236 Daucus carota
Duzib177G0740 Durio zibethinus
ECA240G0490 Erigeron canadensis
EL10Ac1g01458 Beta vulgaris
EL10Ac7g17956 Beta vulgaris
Eucgr.D02590 Eucalyptus grandis
Glyma.09G152000 Glycine max
Glyma.16G202700 Glycine max
Gohir.A08G207900 Gossypium hirsutum
Gohir.D08G224600 Gossypium hirsutum
Gorai.004G238500 Gossypium raimondii
GSVIVG01031638001 Vitis vinifera
HanXRQChr10g0282371 Helianthus annuus
Haze_00287 Corylus avellana
Hund04411 Selenicereus undatus
Lalb_Chr03g0033021 Lupinus albus
Lj2g0010245 Lotus japonicus
Lj9C390T7 Lonicera japonica
Lsat_1_v5_gn_3_68661 Lactuca sativa
Lsat_1_v5_gn_5_56361 Lactuca sativa
Manes.09G083900 Manihot esculenta
Manes.13G075298 Manihot esculenta
MBI05_g23315_MAGBIO Magnolia biondii
MD05G1028600 Malus domestica
MD10G1029200 Malus domestica
Medtr2g103160 Medicago truncatula
Medtr6g004800 Medicago truncatula
MELO3C019016.2 Cucumis melo
Migut.A00568 Erythranthe guttata
MSTRG.25731 Avicennia marina
Nitab4.5_0000009g0140 Nicotiana tabacum
Nitab4.5_0000030g0150 Nicotiana tabacum
Nitab4.5_0002941g0010 Nicotiana tabacum
Nitab4.5_0013752g0010 Nicotiana tabacum
Nn1g10029 Nelumbo nucifera
Nn1g10037 Nelumbo nucifera
Nn1g10155 Nelumbo nucifera
Oeu059435.1 Olea europaea
Os03g0385900 Oryza sativa ssp. japonica
Peaxi162Scf00193g00002 Petunia axillaris
PGR031G3837 Punica granatum
PGSC0003DMG400030869 Solanum tuberosum
Phvul.004G125700 Phaseolus vulgaris
Phvul.007G023100 Phaseolus vulgaris
Potri.007G117700 Populus trichocarpa
Prupe.8G075800 Prunus persica
Psat5g300640 Pisum sativum
PSO339G1081 Papaver somniferum
PSO339G5687 Papaver somniferum
PSO384G0602 Papaver somniferum
PSO648G0043 Papaver somniferum
QL09p007239 Quercus lobata
RcHm_v2.0_Chr7g0213441 Rosa chinensis
Rhsim01G0291600 Rhododendron simsii
Rhsim11G0024600 Rhododendron simsii
SalBow4G2740 Salvia bowleyana
Sc03g0004060 Simmondsia chinensis
Sed0012178 Sechium edule
Sed0026211 Sechium edule
SGA_v2.0_scaffold89G27392 Striga asiatica
SGA_v2.0_scaffold96G29075 Striga asiatica
Solyc08g075720.3 Solanum lycopersicum
Sopen08g024370 Solanum pennellii
Sp1g27520 Schrenkiella parvula
TAR636G3390 Trochodendron aralioides
THA.LOC104798517 Tarenaya hassleriana
THA.LOC104798644 Tarenaya hassleriana
Thecc.05G317100 Theobroma cacao
Thhalv10008153m.g Eutrema salsugineum
TPR.G33266 Trifolium pratense
TWI56G0195 Tripterygium wilfordii
unitig_0.g2835 Utricularia gibba
vmacro00059 Vaccinium macrocarpon
VMungo0464G0461 Vigna mungo
Zm00001eb342930 Zea mays

User provided reference genes

Program Settings