Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08490 Brassica napus
A10p21660 Brassica napus
Aa31LG11G11790 Aethionema arabicum
Aa31LG2G1800 Aethionema arabicum
Actinidia37830 Actinidia chinensis
Ah.02g116040 Amaranthus hybridus
Ah.02g116050 Amaranthus hybridus
AL6G28880 Arabidopsis lyrata
Aqoxy7G02016 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5FGX2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1EK11 Arachis hypogaea
AT5G17790 Arabidopsis thaliana
ATR0068G066 Amborella trichopoda
Atru.chr2.1559 Acer truncatum
AUR62036516 Chenopodium quinoa
AUR62037057 Chenopodium quinoa
BcaB01g04912 Brassica carinata
BcaB01g04913 Brassica carinata
BcaB01g05155 Brassica carinata
BcaB08g36744 Brassica carinata
BolC3t13477H Brassica oleracea
BolC9t58775H Brassica oleracea
BraA03t10172Z Brassica rapa
BraA10t44228Z Brassica rapa
C03p09890 Brassica napus
C09p59360 Brassica napus
CAN.G595.6 Capsicum annuum
CAN.G595.7 Capsicum annuum
CARHR195380 Cardamine hirsuta
Carub.0006s1602 Capsella rubella
Ca_03446_v3 Cicer arietinum L.
Cc06_g21620 Coffea canephora
CDE02G4069 Ceratophyllum demersum
CDE04G0989 Ceratophyllum demersum
CDE04G2250 Ceratophyllum demersum
CDE07G0333 Ceratophyllum demersum
Cfa019867 Carpinus fangiana
Ciclev10030654m.g Citrus clementina
CiPaw.09G165800 Carya illinoinensis
ClCG10G017040 Citrullus lanatus
COL.COLO4_20073 Corchorus olitorius
Cpa.g.sc73.5 Carica papaya
CsaV3_3G039350 Cucumis sativus L.
CSS0021093 Camellia sinensis var. sinensis
CSS0043580 Camellia sinensis var. sinensis
DCAR_020643 Daucus carota
Dinv14567 Davidia involucrata
Dinv37026 Davidia involucrata
Dinv37027 Davidia involucrata
Duzib177G0835 Durio zibethinus
ECA240G3357 Erigeron canadensis
ECA246G3617 Erigeron canadensis
EL10Ac5g11680 Beta vulgaris
Eucgr.A02151 Eucalyptus grandis
Eucgr.K02987 Eucalyptus grandis
FAN15G3048 Fragaria x ananassa
FAN27G0370 Fragaria x ananassa
FvH4_2g05470 Fragaria vesca
Glyma.03G007200 Glycine max
Glyma.19G118900 Glycine max
Gohir.A08G220800 Gossypium hirsutum
Gohir.D08G237400 Gossypium hirsutum
Gorai.004G252900 Gossypium raimondii
GSVIVG01029939001 Vitis vinifera
HanXRQChr03g0076821 Helianthus annuus
HanXRQChr08g0233621 Helianthus annuus
Haze_20390 Corylus avellana
HPP92_017896 Vanilla planifolia
HPP92_017897 Vanilla planifolia
Hund15183 Selenicereus undatus
Lalb_Chr22g0358481 Lupinus albus
Lj1g0022011 Lotus japonicus
Lj2C416G9 Lonicera japonica
Lsat_1_v5_gn_5_2441 Lactuca sativa
Lsat_1_v5_gn_9_93321 Lactuca sativa
Manes.08G151700 Manihot esculenta
MBI19_g44505_MAGBIO Magnolia biondii
MD12G1012900 Malus domestica
MD14G1010700 Malus domestica
Medtr7g087047 Medicago truncatula
MELO3C009680.2 Cucumis melo
Migut.K00219 Erythranthe guttata
MSTRG.6251 Avicennia marina
Nitab4.5_0001330g0010 Nicotiana tabacum
Nitab4.5_0022362g0010 Nicotiana tabacum
Nn3g20153 Nelumbo nucifera
Oeu044203.1 Olea europaea
Os01g0815700 Oryza sativa ssp. japonica
Peaxi162Scf00563g00316 Petunia axillaris
PGR042G0732 Punica granatum
PGSC0003DMG400010935 Solanum tuberosum
Phvul.001G107100 Phaseolus vulgaris
Potri.013G067200 Populus trichocarpa
Prupe.7G017200 Prunus persica
Psat1g033400 Pisum sativum
Psat3g085600 Pisum sativum
PSO541G6198 Papaver somniferum
PSO675G7297 Papaver somniferum
QL07p016723 Quercus lobata
RcHm_v2.0_Chr3g0495901 Rosa chinensis
Rhsim03G0046400 Rhododendron simsii
Sabra13G0058600 Salix brachista
SalBow1G7395 Salvia bowleyana
Sc07g0007620 Simmondsia chinensis
Sc07g0007630 Simmondsia chinensis
Sed0009752 Sechium edule
SGA_v2.0_scaffold12G06081 Striga asiatica
SHI14865 Sapria himalayana
Solyc01g057780.3 Solanum lycopersicum
Sopen01g023080 Solanum pennellii
Sp6g26460 Schrenkiella parvula
TAR633G1955 Trochodendron aralioides
TAR636G0230 Trochodendron aralioides
THA.LOC104798844 Tarenaya hassleriana
THA.LOC104820798 Tarenaya hassleriana
Thecc.05G240300 Theobroma cacao
Thhalv10012756m.g Eutrema salsugineum
TPR.G7838 Trifolium pratense
TWI32G1104 Tripterygium wilfordii
unitig_37.g12689 Utricularia gibba
vmacro07642 Vaccinium macrocarpon
VMungo1383G3098 Vigna mungo
Zm00001eb149830 Zea mays
Zm00001eb369080 Zea mays

User provided reference genes

Program Settings