Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p09040 Brassica napus
Aa31LG8G9890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis
Actinidia11356 Actinidia chinensis
Actinidia39914 Actinidia chinensis
Ah.13g072590 Amaranthus hybridus
AL3G38060 Arabidopsis lyrata
Aqoxy5G00185 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea
AT3G23400 Arabidopsis thaliana
ATR0582G319 Amborella trichopoda
Atru.chr4.2005 Acer truncatum
AUR62002163 Chenopodium quinoa
AUR62015546 Chenopodium quinoa
BcaB01g01688 Brassica carinata
BcaB02g08931 Brassica carinata
BcaB04g17238 Brassica carinata
BcaB05g22938 Brassica carinata
BcaB06g26644 Brassica carinata
BcaB07g33946 Brassica carinata
BcaC06g35517 Brassica carinata
BolC7t41898H Brassica oleracea
BraA07t28698Z Brassica rapa
C07p14010 Brassica napus
CAN.G220.38 Capsicum annuum
CAN.G345.5 Capsicum annuum
CANSAT78G0744 Cannabis sativa
CARHR099370 Cardamine hirsuta
Carub.0003s2366 Capsella rubella
Ca_09849_v3 Cicer arietinum L.
CBR_g30839 Chara braunii
Cc03_g05780 Coffea canephora
CDE03G0089 Ceratophyllum demersum
CDE04G3487 Ceratophyllum demersum
Cfa014742 Carpinus fangiana
Ciclev10007095m.g Citrus clementina
CiPaw.01G181700 Carya illinoinensis
ClCG05G004210 Citrullus lanatus
COL.COLO4_15916 Corchorus olitorius
Cpa.g.sc44.33 Carica papaya
Cpa.g.sc44.36 Carica papaya
Cre02.g143667 Chlamydomonas reinhardtii
Cre03.g197650 Chlamydomonas reinhardtii
CsaV3_3G011940 Cucumis sativus L.
CSS0006599 Camellia sinensis var. sinensis
Dinv27072 Davidia involucrata
Dinv29840 Davidia involucrata
Duzib052G0458 Durio zibethinus
EL10Ac3g04982 Beta vulgaris
Eucgr.H00144 Eucalyptus grandis
FAN12G0128 Fragaria x ananassa
FAN17G1327 Fragaria x ananassa
FAN22G0893 Fragaria x ananassa
Glyma.10G182900 Glycine max
Glyma.20G207100 Glycine max
Gohir.A09G228800 Gossypium hirsutum
Gohir.D09G229900 Gossypium hirsutum
Gorai.006G252600 Gossypium raimondii
GSVIVG01027851001 Vitis vinifera
HanXRQChr14g0434951 Helianthus annuus
Haze_11417 Corylus avellana
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla
HPP92_005402 Vanilla planifolia
Hund11907 Selenicereus undatus
Lalb_Chr06g0169201 Lupinus albus
Lalb_Chr21g0312161 Lupinus albus
Lj3A686T58 Lonicera japonica
Lj5g0003574 Lotus japonicus
Lsat_1_v5_gn_2_40021 Lactuca sativa
Manes.15G043100 Manihot esculenta
Mapoly0012s0134 Marchantia polymorpha
MBI07_g31085_MAGBIO Magnolia biondii
MCO05G338 Micromonas commoda
MD13G1216500 Malus domestica
MD16G1221800 Malus domestica
Medtr1g075660 Medicago truncatula
MELO3C006407.2 Cucumis melo
Migut.N00285 Erythranthe guttata
MSTRG.9882 Avicennia marina
Nitab4.5_0000044g0560 Nicotiana tabacum
Nitab4.5_0000596g0040 Nicotiana tabacum
Nn1g02871 Nelumbo nucifera
Nn1g02875 Nelumbo nucifera
Nn3g19719 Nelumbo nucifera
Oeu059409.1 Olea europaea
Os05g0304200 Oryza sativa ssp. japonica
Os11g0595200 Oryza sativa ssp. japonica
Peaxi162Scf00392g00732 Petunia axillaris
PGR031G2997 Punica granatum
PGSC0003DMG400017164 Solanum tuberosum
Phvul.010G070111 Phaseolus vulgaris
Potri.008G169100 Populus trichocarpa
Pp3c11_17240 Physcomitrium patens
PRCOL_00002195 Prasinoderma coloniale
PRCOL_00005570 Prasinoderma coloniale
Prupe.1G042200 Prunus persica
Psat6g122560 Pisum sativum
PSO017G5682 Papaver somniferum
PSO478G2331 Papaver somniferum
QL06p019206 Quercus lobata
RcHm_v2.0_Chr4g0394281 Rosa chinensis
Rhsim02G0041500 Rhododendron simsii
Sabra08G0128900 Salix brachista
Sabra10G0037800 Salix brachista
Sc13g0005860 Simmondsia chinensis
Sed0005439 Sechium edule
SEGI_38471 Sequoiadendron giganteum
SGA_v2.0_scaffold370G50119 Striga asiatica
SGA_v2.0_scaffold43G16214 Striga asiatica
SMO141G0176 Selaginella moellendorffii
Solyc09g090330.3 Solanum lycopersicum
Sopen09g033230 Solanum pennellii
Sp3g21070 Schrenkiella parvula
THA.LOC104804760 Tarenaya hassleriana
Thecc.04G259000 Theobroma cacao
Thhalv10021276m.g Eutrema salsugineum
TPR.G10084 Trifolium pratense
TWI73G0471 Tripterygium wilfordii
unitig_0.g1188 Utricularia gibba
vmacro15458 Vaccinium macrocarpon
VMungo0720G1276 Vigna mungo
Zm00001eb114860 Zea mays

User provided reference genes

Program Settings