Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25320 Brassica napus
A04p33960 Brassica napus
Aa31LG1G27170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis
Actinidia09582 Actinidia chinensis
Actinidia31456 Actinidia chinensis
Ah.15g094110 Amaranthus hybridus
AL4G44870 Arabidopsis lyrata
AL5G43350 Arabidopsis lyrata
Aqoxy7G00481 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea
AT2G45695 Arabidopsis thaliana
AT3G61113 Arabidopsis thaliana
ATR0757G048 Amborella trichopoda
Atru.chr5.383 Acer truncatum
BcaB01g03257 Brassica carinata
BcaB06g29431 Brassica carinata
BcaC01g05111 Brassica carinata
BolC3t15370H Brassica oleracea
BraA03t11736Z Brassica rapa
BraA04t18857Z Brassica rapa
C03p30210 Brassica napus
CAN.G170.61 Capsicum annuum
CANSAT56G1223 Cannabis sativa
CARHR140920 Cardamine hirsuta
Carub.0004s2835 Capsella rubella
Carub.0005s2776 Capsella rubella
Ca_23766_v3 Cicer arietinum L.
Cc02_g37090 Coffea canephora
CDE11G0029 Ceratophyllum demersum
Cfa001844 Carpinus fangiana
Ciclev10023026m.g Citrus clementina
CiPaw.01G257500 Carya illinoinensis
ClCG06G000160 Citrullus lanatus
COL.COLO4_12638 Corchorus olitorius
Cre10.g426000 Chlamydomonas reinhardtii
CsaV3_6G005910 Cucumis sativus L.
CSS0035991 Camellia sinensis var. sinensis
Dinv32413 Davidia involucrata
Dinv43747 Davidia involucrata
Duzib133G0791 Durio zibethinus
Duzib138G0401 Durio zibethinus
EL10Ac1g00975 Beta vulgaris
Eucgr.E01325 Eucalyptus grandis
FAN19G0283 Fragaria x ananassa
FAN23G1662 Fragaria x ananassa
FAN28G0164 Fragaria x ananassa
FAN28G1401 Fragaria x ananassa
FvH4_1g27190 Fragaria vesca
Glyma.03G018600 Glycine max
Glyma.07G080100 Glycine max
Gohir.A11G084400 Gossypium hirsutum
Gohir.D11G088350 Gossypium hirsutum
Gohir.D11G088500 Gossypium hirsutum
Gorai.007G094600 Gossypium raimondii
GSVIVG01027592001 Vitis vinifera
HanXRQChr04g0126261 Helianthus annuus
Haze_16703 Corylus avellana
Haze_27740 Corylus avellana
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla
HPP92_022119 Vanilla planifolia
Hund09553 Selenicereus undatus
Hund16966 Selenicereus undatus
Lalb_Chr10g0097581 Lupinus albus
Lalb_Chr17g0340031 Lupinus albus
Lj1g0008204 Lotus japonicus
Lsat_1_v5_gn_8_87621 Lactuca sativa
Manes.01G263100 Manihot esculenta
Mapoly0004s0131 Marchantia polymorpha
MBI04_g28569_MAGBIO Magnolia biondii
MD04G1046600 Malus domestica
Medtr8g032860 Medicago truncatula
MELO3C022522.2 Cucumis melo
Migut.C01180 Erythranthe guttata
MSTRG.1480 Avicennia marina
MSTRG.25406 Avicennia marina
Nitab4.5_0001127g0020 Nicotiana tabacum
Nitab4.5_0013229g0010 Nicotiana tabacum
Nn3g17768 Nelumbo nucifera
Nn6g34296 Nelumbo nucifera
Oeu032965.1 Olea europaea
Oeu050256.1 Olea europaea
Os07g0466300 Oryza sativa ssp. japonica
Peaxi162Scf00021g00237 Petunia axillaris
PGR042G1692 Punica granatum
PGSC0003DMG400000132 Solanum tuberosum
Phvul.010G089300 Phaseolus vulgaris
Potri.014G078200 Populus trichocarpa
Pp3c15_11080 Physcomitrium patens
PRCOL_00003278 Prasinoderma coloniale
Prupe.1G200200 Prunus persica
Psat4g151440 Pisum sativum
PSO478G5220 Papaver somniferum
PSO782G1455 Papaver somniferum
PSO782G2080 Papaver somniferum
QL08p050901 Quercus lobata
RcHm_v2.0_Chr3g0487581 Rosa chinensis
Rhsim07G0022300 Rhododendron simsii
Sabra14G0054000 Salix brachista
SalBow8G2260 Salvia bowleyana
Sc23g0003380 Simmondsia chinensis
Sed0009830 Sechium edule
SEGI_03184 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10498 Striga asiatica
SGA_v2.0_scaffold486G52389 Striga asiatica
SHI13486 Sapria himalayana
SMO367G0935 Selaginella moellendorffii
Solyc01g091890.3 Solanum lycopersicum
Sopen01g037660 Solanum pennellii
Sp4g27740 Schrenkiella parvula
TAR375G0946 Trochodendron aralioides
TAR636G0701 Trochodendron aralioides
THA.LOC104802008 Tarenaya hassleriana
Thecc.01G370100 Theobroma cacao
Thhalv10001692m.g Eutrema salsugineum
TPR.G17971 Trifolium pratense
TWI14G0146 Tripterygium wilfordii
TWI59G0287 Tripterygium wilfordii
unitig_37.g12884 Utricularia gibba
vmacro13347 Vaccinium macrocarpon
vmacro20977 Vaccinium macrocarpon
VMungo0331G1339 Vigna mungo
Zm00001eb320180 Zea mays

User provided reference genes

Program Settings