Gene: AT3G61113

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G61113
  • Transcript Identifier AT3G61113.1
  • Gene Type Coding gene
  • Location Chr3 : 22614582-22615415 : negative

Gene Family Information

  • ID HOM05D006419
  • #Genes/#Species 124/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G61113.1
  • Alias URM12,ubiquitin-related modifier 12
  • uniprot B3H7G2

Descriptions

  • Description Ubiquitin related modifier 1
  • Computational description Ubiquitin related modifier 1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin related modifier 1 (InterPro:IPR015221), Ubiquitin-related modifier 1 (InterPro:IPR017188), Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp (InterPro:IPR016155); BEST Arabidopsis thaliana protein match is: Ubiquitin related modifier 1 (TAIR:AT2G45695.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032447
IBA
IEA
GOA Databaseprotein urmylation
GO:0034227
IEA
GOA DatabasetRNA thio-modification
GO:0034227
IEA
InterProtRNA thio-modification
GO:0002098
IEA
GOA DatabasetRNA wobble uridine modification
GO:0008033
IEA
GOA DatabasetRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031386
IBA
GOA Databaseprotein tag

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
GOA Databasecytosol
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015221 Ubiquitin-related modifier 1
IPR012675 Beta-grasp domain superfamily
IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp
Mapman id Description
16.5.5.1.2 RNA processing.RNA modification.thiolation.CTU1-URM1 pathway.sulfur carrier protein (URM1)
19.2.2.7.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.URM conjugation.ubiquitin-fold protein (URM1)