Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p14250 Brassica napus
A09p42040 Brassica napus
Aa31LG7G6600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2277 Anthoceros agrestis
Actinidia29416 Actinidia chinensis
AL1G36240 Arabidopsis lyrata
Aqoxy7G00855 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3A12IQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RC57KJ Arachis hypogaea
AT1G22700 Arabidopsis thaliana
ATR1127G194 Amborella trichopoda
Atru.chr13.1807 Acer truncatum
Atru.chr13.1815 Acer truncatum
AUR62013765 Chenopodium quinoa
AUR62023390 Chenopodium quinoa
BcaB03g14188 Brassica carinata
BcaB03g14190 Brassica carinata
BcaC06g34984 Brassica carinata
BolC5t30876H Brassica oleracea
BolC7t42628H Brassica oleracea
BraA07t29182Z Brassica rapa
BraA09t39690Z Brassica rapa
C05p21830 Brassica napus
C07p20970 Brassica napus
CAN.G61.29 Capsicum annuum
CANSAT78G0580 Cannabis sativa
CARHR023070 Cardamine hirsuta
Carub.0001s2222 Capsella rubella
Ca_10605_v3 Cicer arietinum L.
CBR_g38402 Chara braunii
CBR_g38409 Chara braunii
Cc00_g04840 Coffea canephora
CDE07G1616 Ceratophyllum demersum
Cfa018202 Carpinus fangiana
Ciclev10001887m.g Citrus clementina
CiPaw.16G062500 Carya illinoinensis
ClCG09G010420 Citrullus lanatus
COL.COLO4_36653 Corchorus olitorius
Cpa.g.sc66.55 Carica papaya
Cre12.g524300 Chlamydomonas reinhardtii
CsaV3_7G024130 Cucumis sativus L.
CSS0028864 Camellia sinensis var. sinensis
Dinv41688 Davidia involucrata
Duzib116G0580 Durio zibethinus
Duzib177G0036 Durio zibethinus
ECA233G3842 Erigeron canadensis
EL10Ac1g00740 Beta vulgaris
Eucgr.F02626 Eucalyptus grandis
FAN19G1279 Fragaria x ananassa
FAN23G0108 Fragaria x ananassa
FAN26G2688 Fragaria x ananassa
FAN28G0939 Fragaria x ananassa
FvH4_1g29740 Fragaria vesca
Glyma.10G215300 Glycine max
Glyma.20G176400 Glycine max
Gohir.A13G121700 Gossypium hirsutum
Gohir.D13G125700 Gossypium hirsutum
Gorai.013G140800 Gossypium raimondii
GSVIVG01034503001 Vitis vinifera
HanXRQChr02g0040151 Helianthus annuus
Haze_17907 Corylus avellana
Hma1.2p1_0072F.1_g038220 Hydrangea macrophylla
Hma1.2p1_0072F.1_g038240 Hydrangea macrophylla
HPP92_025360 Vanilla planifolia
Hund27413 Selenicereus undatus
Lalb_Chr01g0010051 Lupinus albus
Lalb_Chr19g0129801 Lupinus albus
Lj5g0000123 Lotus japonicus
Lj7A297T43 Lonicera japonica
Lsat_1_v5_gn_1_12940 Lactuca sativa
Manes.18G099900 Manihot esculenta
Mapoly0015s0041 Marchantia polymorpha
MBI17_g12885_MAGBIO Magnolia biondii
MCO16G319 Micromonas commoda
MD12G1013600 Malus domestica
MD14G1011000 Malus domestica
Medtr1g096230 Medicago truncatula
MELO3C023667.2 Cucumis melo
Migut.C01242 Erythranthe guttata
MSTRG.1510 Avicennia marina
MSTRG.25437 Avicennia marina
Nitab4.5_0000159g0220 Nicotiana tabacum
Nn3g18907 Nelumbo nucifera
Nn8g40759 Nelumbo nucifera
Oeu000555.1 Olea europaea
Oeu017876.2 Olea europaea
Os10g0460900 Oryza sativa ssp. japonica
Peaxi162Scf00495g00011 Petunia axillaris
PGR042G3834 Punica granatum
PGSC0003DMG400009235 Solanum tuberosum
Phvul.007G090400 Phaseolus vulgaris
Potri.013G114500 Populus trichocarpa
Potri.019G085200 Populus trichocarpa
Pp3c1_20680 Physcomitrium patens
Pp3c2_18600 Physcomitrium patens
PRCOL_00002033 Prasinoderma coloniale
Prupe.7G018000 Prunus persica
Psat6g186640 Pisum sativum
PSO675G8117 Papaver somniferum
PSO732G0029 Papaver somniferum
QL02p034075 Quercus lobata
RcHm_v2.0_Chr2g0092511 Rosa chinensis
RcHm_v2.0_Chr3g0495761 Rosa chinensis
RcHm_v2.0_Chr7g0199541 Rosa chinensis
RcHm_v2.0_Chr7g0219671 Rosa chinensis
Rhsim08G0049700 Rhododendron simsii
SalBow7G4031 Salvia bowleyana
Sc23g0004870 Simmondsia chinensis
Sed0020052 Sechium edule
SEGI_04324 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10549 Striga asiatica
SMO118G0451 Selaginella moellendorffii
Solyc11g017200.2 Solanum lycopersicum
Sopen11g009110 Solanum pennellii
Sp1g20210 Schrenkiella parvula
THA.LOC104800111 Tarenaya hassleriana
Thecc.08G202600 Theobroma cacao
Thhalv10008318m.g Eutrema salsugineum
TPR.G1762 Trifolium pratense
TPR.G20530 Trifolium pratense
TWI32G0485 Tripterygium wilfordii
unitig_747.g21467 Utricularia gibba
vmacro18286 Vaccinium macrocarpon
Zm00001eb320270 Zea mays

User provided reference genes

Program Settings