Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00110 Brassica napus
A07p33750 Brassica napus
Aa31LG3G17390 Aethionema arabicum
Aa31sc1834G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1159 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4124 Anthoceros agrestis
Ah.10g038740 Amaranthus hybridus
AL6G20110 Arabidopsis lyrata
Aqoxy5G04067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N2H6V0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q955DD Arachis hypogaea
AT5G09680 Arabidopsis thaliana
ATR0618G422 Amborella trichopoda
Atru.chr11.2585 Acer truncatum
AUR62009399 Chenopodium quinoa
AUR62023082 Chenopodium quinoa
AUR62027968 Chenopodium quinoa
AUR62042252 Chenopodium quinoa
BcaB05g21537 Brassica carinata
BcaB08g37153 Brassica carinata
BcaC03g13270 Brassica carinata
BolC2t06362H Brassica oleracea
BraA02t04996Z Brassica rapa
C02p04000 Brassica napus
CAN.G219.51 Capsicum annuum
CANSAT80G0022 Cannabis sativa
CARHR203710 Cardamine hirsuta
Carub.0004s0655 Capsella rubella
Carub.0008s1534 Capsella rubella
Ca_14667_v3 Cicer arietinum L.
CBR_g29320 Chara braunii
Cc02_g28340 Coffea canephora
CDE02G1674 Ceratophyllum demersum
Cfa026803 Carpinus fangiana
Ciclev10032828m.g Citrus clementina
CiPaw.13G007100 Carya illinoinensis
CiPaw.14G001800 Carya illinoinensis
ClCG09G003970 Citrullus lanatus
ClCG09G003980 Citrullus lanatus
COL.COLO4_24418 Corchorus olitorius
Cpa.g.sc12.280 Carica papaya
Cre13.g574800 Chlamydomonas reinhardtii
CsaV3_7G030870 Cucumis sativus L.
CSS0038258 Camellia sinensis var. sinensis
DCAR_023954 Daucus carota
Dinv09327 Davidia involucrata
Dinv43416 Davidia involucrata
Duzib133G0472 Durio zibethinus
EL10Ac2g04346 Beta vulgaris
Eucgr.G03365 Eucalyptus grandis
FAN01G1980 Fragaria x ananassa
FAN03G2871 Fragaria x ananassa
FAN06G0074 Fragaria x ananassa
FAN10G1589 Fragaria x ananassa
FvH4_7g01340 Fragaria vesca
Glyma.09G227600 Glycine max
Glyma.12G009100 Glycine max
Gohir.A12G094300 Gossypium hirsutum
Gohir.D12G097000 Gossypium hirsutum
Gorai.008G105500 Gossypium raimondii
GSVIVG01032154001 Vitis vinifera
HanXRQChr01g0015801 Helianthus annuus
HanXRQChr12g0357631 Helianthus annuus
Haze_03172 Corylus avellana
Hma1.2p1_1328F.1_g275960 Hydrangea macrophylla
HPP92_005467 Vanilla planifolia
Hund18591 Selenicereus undatus
Lalb_Chr01g0000431 Lupinus albus
Lj3g0003899 Lotus japonicus
Lj3g0011240 Lotus japonicus
Lj9C636G13 Lonicera japonica
Lj9C638G12 Lonicera japonica
Lsat_1_v5_gn_1_105261 Lactuca sativa
Manes.07G007700 Manihot esculenta
Mapoly0022s0092 Marchantia polymorpha
MBI02_g23139_MAGBIO Magnolia biondii
MBI04_g17676_MAGBIO Magnolia biondii
MCO04G106 Micromonas commoda
MD02G1307800 Malus domestica
MD07G1017800 Malus domestica
Medtr0085s0010 Medicago truncatula
Migut.N01783 Erythranthe guttata
Migut.O00526 Erythranthe guttata
MSTRG.17017 Avicennia marina
MSTRG.20569 Avicennia marina
Nitab4.5_0000087g0020 Nicotiana tabacum
Nitab4.5_0000707g0250 Nicotiana tabacum
Nitab4.5_0005981g0020 Nicotiana tabacum
Nn7g36262 Nelumbo nucifera
Oeu049007.1 Olea europaea
Os07g0232200 Oryza sativa ssp. japonica
Peaxi162Scf00019g00017 Petunia axillaris
Peaxi162Scf00071g01141 Petunia axillaris
PGR031G0767 Punica granatum
PGSC0003DMG401006791 Solanum tuberosum
Phvul.004G011500 Phaseolus vulgaris
Potri.001G263800 Populus trichocarpa
Pp3c20_23480 Physcomitrium patens
PRCOL_00001468 Prasinoderma coloniale
Prupe.2G017700 Prunus persica
Prupe.2G019000 Prunus persica
Psat0s1243g0040 Pisum sativum
QL04p008819 Quercus lobata
RcHm_v2.0_Chr1g0317051 Rosa chinensis
Rhsim07G0057200 Rhododendron simsii
Sabra16G0162000 Salix brachista
SalBow6G4289 Salvia bowleyana
Sc16g0002910 Simmondsia chinensis
Sed0027296 Sechium edule
SEGI_35641 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32747 Striga asiatica
SHI04081 Sapria himalayana
SMO331G0043 Selaginella moellendorffii
Solyc01g087550.3 Solanum lycopersicum
Sopen01g034520 Solanum pennellii
Sp6g33690 Schrenkiella parvula
TAR633G2637 Trochodendron aralioides
Thecc.01G408200 Theobroma cacao
Thecc.09G178400 Theobroma cacao
Thhalv10014674m.g Eutrema salsugineum
TWI53G0677 Tripterygium wilfordii
TWI74G1214 Tripterygium wilfordii
unitig_8.g3776 Utricularia gibba
vmacro13685 Vaccinium macrocarpon
VMungo0464G1625 Vigna mungo
Zm00001eb095000 Zea mays

User provided reference genes

Program Settings