Gene: AT5G09680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G09680
  • Transcript Identifier AT5G09680.3
  • Gene Type Coding gene
  • Location Chr5 : 2999362-3000603 : negative

Gene Family Information

  • ID HOM05D006324
  • #Genes/#Species 126/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G09680.3
  • symbol RLF
  • uniprot Q9LXD1

Descriptions

  • Description reduced lateral root formation
  • Computational description reduced lateral root formation (RLF); FUNCTIONS IN: heme binding; INVOLVED IN: lateral root formation; LOCATED IN: cytosol; EXPRESSED IN: stem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome b5, heme-binding site (InterPro:IPR018506), Cytochrome b5 (InterPro:IPR001199); BEST Arabidopsis thaliana protein match is: cytochrome B5 isoform A (TAIR:AT1G26340.1); Has 3049 Blast hits to 3033 proteins in 420 species: Archae - 2; Bacteria - 7; Metazoa - 694; Fungi - 1150; Plants - 759; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010311
IMP
Gene Ontologylateral root formation1
GO:0040008
IEA
GOA Databaseregulation of growth

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0020037
IEA
Gene Ontologyheme binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005829
IEA
GOA Databasecytosol
GO:0005829
IDA
IBA
Gene Ontologycytosol1 2
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001199 Cytochrome b5-like heme/steroid binding domain
IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily
Mapman id Description
35.1 not assigned.annotated