Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32260 Brassica napus
Aa31LG8G4460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis
Actinidia24554 Actinidia chinensis
Ah.07g202850 Amaranthus hybridus
AL3G30660 Arabidopsis lyrata
Aqoxy2G02444 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea
AT3G17590 Arabidopsis thaliana
ATR0796G033 Amborella trichopoda
Atru.chr4.3188 Acer truncatum
AUR62002525 Chenopodium quinoa
AUR62023666 Chenopodium quinoa
BcaB06g25834 Brassica carinata
BcaC05g28772 Brassica carinata
BolC5t33616H Brassica oleracea
BraA05t22055Z Brassica rapa
C05p48790 Brassica napus
CAN.G255.2 Capsicum annuum
CANSAT56G2492 Cannabis sativa
CARHR092900 Cardamine hirsuta
Carub.0003s1730 Capsella rubella
Ca_21361_v3 Cicer arietinum L.
CBR_g38190 Chara braunii
CBR_g53839 Chara braunii
Cc07_g19930 Coffea canephora
CDE12G0513 Ceratophyllum demersum
Cfa015754 Carpinus fangiana
Cfa025220 Carpinus fangiana
Ciclev10005749m.g Citrus clementina
CiPaw.01G127100 Carya illinoinensis
ClCG05G006940 Citrullus lanatus
COL.COLO4_13438 Corchorus olitorius
Cpa.g.c44700 Carica papaya
Cpa.g.sc146.8 Carica papaya
Cre14.g619613 Chlamydomonas reinhardtii
CsaV3_3G015610 Cucumis sativus L.
CSS0010190 Camellia sinensis var. sinensis
CSS0015998 Camellia sinensis var. sinensis
CSS0037556 Camellia sinensis var. sinensis
CSS0049495 Camellia sinensis var. sinensis
DCAR_002560 Daucus carota
DCAR_030416 Daucus carota
Dinv32178 Davidia involucrata
Duzib128G0584 Durio zibethinus
ECA246G2315 Erigeron canadensis
EL10Ac3g06220 Beta vulgaris
Eucgr.B02199 Eucalyptus grandis
FAN07G2419 Fragaria x ananassa
FAN12G0215 Fragaria x ananassa
FAN17G2953 Fragaria x ananassa
FvH4_4g21770 Fragaria vesca
Glyma.09G159500 Glycine max
Glyma.13G117200 Glycine max
Glyma.17G042702 Glycine max
Gohir.A05G000600 Gossypium hirsutum
Gohir.A09G135800 Gossypium hirsutum
Gohir.D05G000900 Gossypium hirsutum
Gohir.D09G137500 Gossypium hirsutum
Gorai.006G157900 Gossypium raimondii
Gorai.009G000800 Gossypium raimondii
GSVIVG01017710001 Vitis vinifera
HanXRQChr05g0148931 Helianthus annuus
Haze_00749 Corylus avellana
HPP92_002633 Vanilla planifolia
Hund12266 Selenicereus undatus
Lalb_Chr12g0200491 Lupinus albus
Lj2g0021371 Lotus japonicus
Lj2g0021665 Lotus japonicus
Lj2g0027794 Lotus japonicus
Lj4g0011706 Lotus japonicus
Lj6A704G50 Lonicera japonica
LjContig00575g0004232 Lotus japonicus
LjContig00576g0014419 Lotus japonicus
Lsat_1_v5_gn_6_117760 Lactuca sativa
Manes.05G122900 Manihot esculenta
Mapoly0059s0054 Marchantia polymorpha
MD13G1137100 Malus domestica
Medtr4g124260 Medicago truncatula
MELO3C006760.2 Cucumis melo
Migut.B00749 Erythranthe guttata
MSTRG.20325 Avicennia marina
Nitab4.5_0000051g0260 Nicotiana tabacum
Nitab4.5_0004737g0050 Nicotiana tabacum
Nn4g25293 Nelumbo nucifera
Os02g0723700 Oryza sativa ssp. japonica
Peaxi162Scf00571g00412 Petunia axillaris
PGR031G3724 Punica granatum
PGSC0003DMG400027786 Solanum tuberosum
Phvul.003G124500 Phaseolus vulgaris
Potri.010G004100 Populus trichocarpa
Prupe.1G208100 Prunus persica
Psat4g020720 Pisum sativum
PSO210G4075 Papaver somniferum
PSO761G0163 Papaver somniferum
QL06p014723 Quercus lobata
RcHm_v2.0_Chr4g0428001 Rosa chinensis
RcHm_v2.0_Chr5g0025761 Rosa chinensis
Rhsim04G0168300 Rhododendron simsii
Rhsim04G0168500 Rhododendron simsii
Rhsim13G0235700 Rhododendron simsii
Sabra10G0003500 Salix brachista
SalBow7G1663 Salvia bowleyana
Sc19g0002500 Simmondsia chinensis
Sed0018318 Sechium edule
SEGI_01321 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34373 Striga asiatica
SHI09041 Sapria himalayana
SMO358G0571 Selaginella moellendorffii
Solyc11g013400.3 Solanum lycopersicum
Solyc11g013410.2 Solanum lycopersicum
Sopen11g008410 Solanum pennellii
Sopen11g008420 Solanum pennellii
Sp3g15720 Schrenkiella parvula
TAR362G1307 Trochodendron aralioides
TAR365G1184 Trochodendron aralioides
THA.LOC104826519 Tarenaya hassleriana
Thecc.03G258800 Theobroma cacao
Thhalv10021423m.g Eutrema salsugineum
TPR.G12708 Trifolium pratense
TWI74G1230 Tripterygium wilfordii
unitig_578.g15959 Utricularia gibba
vmacro04190 Vaccinium macrocarpon
VMungo1215G0091 Vigna mungo
Zm00001eb354530 Zea mays

User provided reference genes

Program Settings