Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p07250 Brassica napus
Aa31LG10G7200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis
Actinidia20679 Actinidia chinensis
AL5G32680 Arabidopsis lyrata
Aqoxy2G00116 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea
AT3G52115 Arabidopsis thaliana
ATR0824G264 Amborella trichopoda
AUR62005634 Chenopodium quinoa
AUR62028915 Chenopodium quinoa
BcaB02g08586 Brassica carinata
BcaC02g09279 Brassica carinata
BolC4t25665H Brassica oleracea
BraA04t16420Z Brassica rapa
C04p40810 Brassica napus
CAN.G170.124 Capsicum annuum
CANSAT01G2414 Cannabis sativa
CARHR161840 Cardamine hirsuta
Carub.0005s1845 Capsella rubella
Ca_23874_v3 Cicer arietinum L.
Cc02_g27560 Coffea canephora
CDE04G2764 Ceratophyllum demersum
Ciclev10030953m.g Citrus clementina
CiPaw.13G003200 Carya illinoinensis
ClCG09G004310 Citrullus lanatus
COL.COLO4_23913 Corchorus olitorius
Cpa.g.sc234.10 Carica papaya
Cre04.g227750 Chlamydomonas reinhardtii
CsaV3_7G031230 Cucumis sativus L.
CSS0048133 Camellia sinensis var. sinensis
DCAR_006240 Daucus carota
Dinv09374 Davidia involucrata
Dinv09375 Davidia involucrata
Dinv14267 Davidia involucrata
Dinv14268 Davidia involucrata
Duzib268G1473 Durio zibethinus
ECA234G4003 Erigeron canadensis
EL10Ac6g13519 Beta vulgaris
Eucgr.J01260 Eucalyptus grandis
FAN01G1556 Fragaria x ananassa
FAN01G3121 Fragaria x ananassa
FAN03G0134 Fragaria x ananassa
FAN06G1370 Fragaria x ananassa
FAN10G1835 Fragaria x ananassa
FvH4_7g00721 Fragaria vesca
Glyma.12G238500 Glycine max
Glyma.13G204200 Glycine max
Gohir.A11G160200 Gossypium hirsutum
Gohir.D11G166400 Gossypium hirsutum
Gorai.007G177400 Gossypium raimondii
GSVIVG01032060001 Vitis vinifera
HanXRQChr16g0519571 Helianthus annuus
Haze_03235 Corylus avellana
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla
Hund03633 Selenicereus undatus
Lalb_Chr03g0033951 Lupinus albus
Lj3g0014839 Lotus japonicus
Lj9A629T105 Lonicera japonica
Lsat_1_v5_gn_4_46080 Lactuca sativa
Manes.07G004300 Manihot esculenta
Manes.10G146200 Manihot esculenta
Mapoly0001s0083 Marchantia polymorpha
MBI01_g40597_MAGBIO Magnolia biondii
MCO05G132 Micromonas commoda
MD02G1315100 Malus domestica
MD07G1006900 Malus domestica
Medtr8g036940 Medicago truncatula
MELO3C023535.2 Cucumis melo
Migut.B01331 Erythranthe guttata
MSTRG.20601 Avicennia marina
MSTRG.5009 Avicennia marina
Nitab4.5_0001542g0030 Nicotiana tabacum
Nitab4.5_0003361g0010 Nicotiana tabacum
Nn2g15492 Nelumbo nucifera
Oeu039119.3 Olea europaea
Os06g0613400 Oryza sativa ssp. japonica
Peaxi162Scf00428g00816 Petunia axillaris
PGR044G1516 Punica granatum
PGSC0003DMG400006815 Solanum tuberosum
Phvul.011G212200 Phaseolus vulgaris
Potri.001G269700 Populus trichocarpa
Potri.009G064200 Populus trichocarpa
Pp3c16_2140 Physcomitrium patens
Prupe.2G009900 Prunus persica
Psat4g148560 Pisum sativum
PSO210G6454 Papaver somniferum
PSO210G6643 Papaver somniferum
PSO447G0216 Papaver somniferum
QL04p005267 Quercus lobata
QL04p005292 Quercus lobata
QL04p005302 Quercus lobata
RcHm_v2.0_Chr1g0314941 Rosa chinensis
Rhsim01G0130600 Rhododendron simsii
Rhsim01G0130700 Rhododendron simsii
Sabra09G0047500 Salix brachista
SalBow7G2237 Salvia bowleyana
Sc14g0005130 Simmondsia chinensis
Sed0005202 Sechium edule
Sed0013445 Sechium edule
SEGI_32119 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32715 Striga asiatica
SGA_v2.0_scaffold167G38459 Striga asiatica
SMO196G0201 Selaginella moellendorffii
SMO351G0024 Selaginella moellendorffii
Solyc01g086930.4 Solanum lycopersicum
Sopen01g033930 Solanum pennellii
Sp5g10170 Schrenkiella parvula
TAR636G0096 Trochodendron aralioides
TAR636G3118 Trochodendron aralioides
THA.LOC104802360 Tarenaya hassleriana
THA.LOC104817627 Tarenaya hassleriana
THA.LOC109117177 Tarenaya hassleriana
Thecc.01G413600 Theobroma cacao
Thhalv10010216m.g Eutrema salsugineum
TPR.G21742 Trifolium pratense
TWI09G0861 Tripterygium wilfordii
TWI73G0538 Tripterygium wilfordii
unitig_8.g3859 Utricularia gibba
unitig_8.g3860 Utricularia gibba
vmacro21179 Vaccinium macrocarpon
vmacro21180 Vaccinium macrocarpon
VMungo1127G1733 Vigna mungo
Zm00001eb388310 Zea mays

User provided reference genes

Program Settings