Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35430 Brassica napus
Aa31LG11G3890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis
Actinidia08720 Actinidia chinensis
Ah.13g071040 Amaranthus hybridus
AL6G36240 Arabidopsis lyrata
Aqoxy7G02781 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea
AT5G24630 Arabidopsis thaliana
ATR0626G063 Amborella trichopoda
Atru.chr12.2501 Acer truncatum
Atru.chr12.2525 Acer truncatum
AUR62005949 Chenopodium quinoa
AUR62028116 Chenopodium quinoa
AUR62030650 Chenopodium quinoa
BcaNung01248 Brassica carinata
BcaNung02006 Brassica carinata
BolC7t44835H Brassica oleracea
BraA06t26466Z Brassica rapa
C07p43080 Brassica napus
CAN.G303.58 Capsicum annuum
CANSAT21G1902 Cannabis sativa
CARHR188820 Cardamine hirsuta
Carub.0006s2249 Capsella rubella
Ca_16838_v3 Cicer arietinum L.
CBR_g24064 Chara braunii
CBR_g31160 Chara braunii
Cc02_g00600 Coffea canephora
CDE02G3091 Ceratophyllum demersum
CDE06G1557 Ceratophyllum demersum
Cfa016128 Carpinus fangiana
Ciclev10005393m.g Citrus clementina
Ciclev10023238m.g Citrus clementina
CiPaw.06G038300 Carya illinoinensis
CiPaw.10G123600 Carya illinoinensis
ClCG07G009750 Citrullus lanatus
COL.COLO4_14399 Corchorus olitorius
Cpa.g.sc3.186 Carica papaya
Cre02.g105050 Chlamydomonas reinhardtii
CsaV3_2G019700 Cucumis sativus L.
CSS0047728 Camellia sinensis var. sinensis
DCAR_010558 Daucus carota
Dinv29192 Davidia involucrata
Duzib205G1288 Durio zibethinus
ECA238G0260 Erigeron canadensis
EL10Ac3g05132 Beta vulgaris
Eucgr.K00479 Eucalyptus grandis
FAN01G0327 Fragaria x ananassa
FAN03G1266 Fragaria x ananassa
FAN10G1913 Fragaria x ananassa
FAN10G3443 Fragaria x ananassa
FvH4_7g33320 Fragaria vesca
Glyma.03G049200 Glycine max
Glyma.04G225700 Glycine max
Glyma.06G139100 Glycine max
Gohir.A08G106400 Gossypium hirsutum
Gohir.D08G117800 Gossypium hirsutum
Gorai.004G126300 Gossypium raimondii
GSVIVG01038680001 Vitis vinifera
HanXRQChr04g0117941 Helianthus annuus
Haze_00334 Corylus avellana
Hma1.2p1_1235F.1_g269240 Hydrangea macrophylla
HPP92_017116 Vanilla planifolia
HPP92_017121 Vanilla planifolia
Hund09753 Selenicereus undatus
Lalb_Chr23g0272041 Lupinus albus
Lj1g0014471 Lotus japonicus
LjContig00312_ERROPOS870357g0003049 Lotus japonicus
Lsat_1_v5_gn_2_135460 Lactuca sativa
Manes.18G108300 Manihot esculenta
Mapoly0143s0029 Marchantia polymorpha
MBI16_g10337_MAGBIO Magnolia biondii
MCO04G384 Micromonas commoda
MD01G1231400 Malus domestica
MD07G1303400 Malus domestica
Medtr3g093330 Medicago truncatula
MELO3C023191.2 Cucumis melo
Migut.F00123 Erythranthe guttata
MSTRG.26953 Avicennia marina
Nitab4.5_0000021g0190 Nicotiana tabacum
Nitab4.5_0007121g0020 Nicotiana tabacum
Nn5g26949 Nelumbo nucifera
Nn7g37003 Nelumbo nucifera
Oeu010718.2 Olea europaea
Os02g0147100 Oryza sativa ssp. japonica
Os02g0147700 Oryza sativa ssp. japonica
Peaxi162Scf01026g00268 Petunia axillaris
PGR142G2769 Punica granatum
PGSC0003DMG400000548 Solanum tuberosum
Phvul.009G040200 Phaseolus vulgaris
Potri.012G004700 Populus trichocarpa
Potri.015G000701 Populus trichocarpa
Pp3c11_21910 Physcomitrium patens
Pp3c7_3940 Physcomitrium patens
Prupe.2G322100 Prunus persica
Psat6g243000 Pisum sativum
PSO063G0207 Papaver somniferum
PSO170G0956 Papaver somniferum
PSO384G0555 Papaver somniferum
PSO384G3009 Papaver somniferum
QL09p006002 Quercus lobata
RcHm_v2.0_Chr1g0383301 Rosa chinensis
Rhsim03G0218400 Rhododendron simsii
Sabra12G0000500 Salix brachista
Sabra12G0006800 Salix brachista
Sabra15G0000500 Salix brachista
SalBow4G0692 Salvia bowleyana
Sc19g0000370 Simmondsia chinensis
Sed0010003 Sechium edule
SEGI_26440 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08496 Striga asiatica
Solyc03g079950.4 Solanum lycopersicum
Sopen03g027470 Solanum pennellii
Sp2g22750 Schrenkiella parvula
TAR626G1328 Trochodendron aralioides
THA.LOC104803317 Tarenaya hassleriana
Thecc.03G212000 Theobroma cacao
Thhalv10004336m.g Eutrema salsugineum
TPR.G35912 Trifolium pratense
TWI59G0797 Tripterygium wilfordii
vmacro06474 Vaccinium macrocarpon
VMungo1309G1324 Vigna mungo
Zm00001eb232230 Zea mays

User provided reference genes

Program Settings