Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p40490 Brassica napus
Aa31LG4G5060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1400 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2637 Anthoceros agrestis
Actinidia04949 Actinidia chinensis
Actinidia37684 Actinidia chinensis
Ah.11g046350 Amaranthus hybridus
AL2G34730 Arabidopsis lyrata
Aqoxy3G03170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C8Z94U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCM1HB Arachis hypogaea
AT1G74850 Arabidopsis thaliana
ATR0681G229 Amborella trichopoda
Atru.BG.200.p Acer truncatum
AUR62008306 Chenopodium quinoa
AUR62021789 Chenopodium quinoa
AUR62021792 Chenopodium quinoa
BcaC08g46908 Brassica carinata
BcaC08g46912 Brassica carinata
BcaC08g46950 Brassica carinata
BolC6t39922H Brassica oleracea
BraA07t31592Z Brassica rapa
C06p48860 Brassica napus
CAN.G853.39 Capsicum annuum
CANSAT80G1888 Cannabis sativa
CARHR068160 Cardamine hirsuta
CARHR068170 Cardamine hirsuta
Carub.0002s2163 Capsella rubella
Ca_21873_v3 Cicer arietinum L.
CBR_g10873 Chara braunii
CBR_g38428 Chara braunii
CBR_g50248 Chara braunii
CBR_g63077 Chara braunii
Cc04_g16120 Coffea canephora
CDE10G0055 Ceratophyllum demersum
CDE10G0083 Ceratophyllum demersum
Ciclev10018817m.g Citrus clementina
CiPaw.11G034100 Carya illinoinensis
ClCG01G014190 Citrullus lanatus
COL.COLO4_26823 Corchorus olitorius
Cpa.g.sc35.13 Carica papaya
CsaV3_1G008120 Cucumis sativus L.
CSS0020542 Camellia sinensis var. sinensis
CSS0026115 Camellia sinensis var. sinensis
CSS0050348 Camellia sinensis var. sinensis
DCAR_016511 Daucus carota
Dinv02652 Davidia involucrata
Dinv05875 Davidia involucrata
Dinv13121 Davidia involucrata
Duzib205G0682 Durio zibethinus
ECA232G0106 Erigeron canadensis
ECA232G4291 Erigeron canadensis
EL10Ac5g10869 Beta vulgaris
Eucgr.K02896 Eucalyptus grandis
FAN04G0516 Fragaria x ananassa
FAN08G1390 Fragaria x ananassa
FAN13G2523 Fragaria x ananassa
FAN18G2370 Fragaria x ananassa
FvH4_5g08849 Fragaria vesca
FvH4_5g16180 Fragaria vesca
Glyma.05G032300 Glycine max
Glyma.17G094300 Glycine max
Gohir.A12G276600 Gossypium hirsutum
Gohir.D12G277600 Gossypium hirsutum
Gorai.008G298300 Gossypium raimondii
GSVIVG01007844001 Vitis vinifera
HanXRQChr16g0503451 Helianthus annuus
Haze_07417 Corylus avellana
Hma1.2p1_0572F.1_g181080 Hydrangea macrophylla
Hma1.2p1_0572F.1_g181090 Hydrangea macrophylla
HPP92_019917 Vanilla planifolia
Hund02699 Selenicereus undatus
Lalb_Chr12g0201281 Lupinus albus
Lj4g0005624 Lotus japonicus
Lj9C455T7 Lonicera japonica
Lsat_1_v5_gn_4_74540 Lactuca sativa
Manes.06G099200 Manihot esculenta
Mapoly0003s0152 Marchantia polymorpha
MBI15_g21026_MAGBIO Magnolia biondii
MD06G1183200 Malus domestica
MD14G1189200 Malus domestica
Medtr4g107210 Medicago truncatula
MELO3C002229.2 Cucumis melo
Migut.I00075 Erythranthe guttata
MSTRG.23079 Avicennia marina
Nn4g22966 Nelumbo nucifera
Os03g0824100 Oryza sativa ssp. japonica
Peaxi162Scf00017g02228 Petunia axillaris
PGR044G0185 Punica granatum
PGSC0003DMG400024573 Solanum tuberosum
Phvul.003G195800 Phaseolus vulgaris
Potri.015G069100 Populus trichocarpa
Pp3c11_11830 Physcomitrium patens
Pp3c14_19310 Physcomitrium patens
Pp3c4_4900 Physcomitrium patens
Prupe.5G181900 Prunus persica
Psat4g055880 Pisum sativum
PSO591G0410 Papaver somniferum
PSO832G0921 Papaver somniferum
QL10p013967 Quercus lobata
RcHm_v2.0_Chr7g0179951 Rosa chinensis
Rhsim08G0164000 Rhododendron simsii
Sabra15G0093400 Salix brachista
SalBow5G1548 Salvia bowleyana
Sc12g0005700 Simmondsia chinensis
Sed0017741 Sechium edule
Sed0019903 Sechium edule
SEGI_07964 Sequoiadendron giganteum
SEGI_32227 Sequoiadendron giganteum
SGA_v2.0_scaffold56G20089 Striga asiatica
SMO353G0114 Selaginella moellendorffii
Solyc03g113630.3 Solanum lycopersicum
Sopen03g032670 Solanum pennellii
Sp5g29980 Schrenkiella parvula
TAR374G0553 Trochodendron aralioides
TAR374G1103 Trochodendron aralioides
TAR622G0668 Trochodendron aralioides
THA.LOC104809230 Tarenaya hassleriana
Thecc.03G001400 Theobroma cacao
Thhalv10018112m.g Eutrema salsugineum
TPR.G38418 Trifolium pratense
TWI15G0191 Tripterygium wilfordii
unitig_750.g28482 Utricularia gibba
unitig_750.g28484 Utricularia gibba
vmacro19344 Vaccinium macrocarpon
VMungo1215G1148 Vigna mungo
VMungo1215G2521 Vigna mungo
Zm00001eb331750 Zea mays

User provided reference genes

Program Settings