Gene: SGA_v2.0_scaffold56G20089

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold56G20089
  • Transcript Identifier SGA_v2.0_scaffold56T20089
  • Gene Type Coding gene
  • Location scaffold56 : 2032156-2038458 : positive

Gene Family Information

  • ID HOM05D006217
  • #Genes/#Species 128/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G74850
GO:0042793
ISO
PLAZA Integrative Orthologyplastid transcription AT1G74850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009508
ISO
PLAZA Integrative Orthologyplastid chromosome AT1G74850
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G74850
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT1G74850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
15.6.1.2.2.2 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP2/TAC2