Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p02950 Brassica napus
Aa31LG10G3660 Aethionema arabicum
Actinidia35344 Actinidia chinensis
Ah.06g186030 Amaranthus hybridus
AL1G58340 Arabidopsis lyrata
Aqoxy1G03401 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea
AT1G50670 Arabidopsis thaliana
ATR0794G016 Amborella trichopoda
AUR62015764 Chenopodium quinoa
AUR62015776 Chenopodium quinoa
AUR62020447 Chenopodium quinoa
BcaB07g33507 Brassica carinata
BcaC08g43245 Brassica carinata
BolC6t35706H Brassica oleracea
BraA06t23501Z Brassica rapa
C06p05930 Brassica napus
CAN.G337.132 Capsicum annuum
CANSAT11G0252 Cannabis sativa
CARHR040720 Cardamine hirsuta
Carub.0001s3971 Capsella rubella
Ca_06320_v3 Cicer arietinum L.
Ca_30809_v3 Cicer arietinum L.
CBR_g54108 Chara braunii
Cc05_g13690 Coffea canephora
CDE05G0514 Ceratophyllum demersum
Cfa020345 Carpinus fangiana
Cfa025770 Carpinus fangiana
Ciclev10009486m.g Citrus clementina
CiPaw.11G189300 Carya illinoinensis
CiPaw.12G129700 Carya illinoinensis
ClCG09G010800 Citrullus lanatus
COL.COLO4_09662 Corchorus olitorius
Cpa.g.sc97.3 Carica papaya
Cre06.g274700 Chlamydomonas reinhardtii
Cre09.g409050 Chlamydomonas reinhardtii
CsaV3_7G021800 Cucumis sativus L.
CSS0042680 Camellia sinensis var. sinensis
CSS0049447 Camellia sinensis var. sinensis
DCAR_022562 Daucus carota
Dinv22262 Davidia involucrata
Dinv40753 Davidia involucrata
Duzib170G0579 Durio zibethinus
ECA246G0646 Erigeron canadensis
EL10Ac4g07806 Beta vulgaris
Eucgr.F00764 Eucalyptus grandis
FAN11G0395 Fragaria x ananassa
FAN16G3112 Fragaria x ananassa
FAN21G2137 Fragaria x ananassa
FAN25G1478 Fragaria x ananassa
FvH4_3g22670 Fragaria vesca
Glyma.02G291000 Glycine max
Glyma.14G023700 Glycine max
Gohir.A01G079500 Gossypium hirsutum
Gohir.D01G066500 Gossypium hirsutum
Gorai.002G088500 Gossypium raimondii
GSVIVG01037647001 Vitis vinifera
HanXRQChr05g0159371 Helianthus annuus
HanXRQChr08g0233871 Helianthus annuus
Haze_09689 Corylus avellana
Haze_26155 Corylus avellana
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla
HPP92_016292 Vanilla planifolia
HPP92_016311 Vanilla planifolia
HPP92_016312 Vanilla planifolia
Lalb_Chr10g0106971 Lupinus albus
Lalb_Chr17g0348481 Lupinus albus
Lj1A872G52 Lonicera japonica
LjContig00272g0005891 Lotus japonicus
Lsat_1_v5_gn_5_3960 Lactuca sativa
Manes.15G071900 Manihot esculenta
Mapoly0105s0022 Marchantia polymorpha
MBI18_g14476_MAGBIO Magnolia biondii
MCO07G461 Micromonas commoda
MD11G1218600 Malus domestica
Medtr5g092720 Medicago truncatula
MELO3C013167.2 Cucumis melo
Migut.K00331 Erythranthe guttata
MSTRG.26280 Avicennia marina
Nitab4.5_0001913g0160 Nicotiana tabacum
Nitab4.5_0011129g0020 Nicotiana tabacum
Nn1g03532 Nelumbo nucifera
Oeu005532.1 Olea europaea
Oeu062696.2 Olea europaea
Os02g0164800 Oryza sativa ssp. japonica
Peaxi162Scf00964g00021 Petunia axillaris
PGR083G2749 Punica granatum
PGSC0003DMG400022319 Solanum tuberosum
Phvul.008G266900 Phaseolus vulgaris
Potri.001G435500 Populus trichocarpa
Potri.011G139500 Populus trichocarpa
Pp3c26_11120 Physcomitrium patens
PRCOL_00006206 Prasinoderma coloniale
Prupe.4G212700 Prunus persica
Prupe.4G233700 Prunus persica
Psat2g010920 Pisum sativum
PSO210G0259 Papaver somniferum
PSO541G4439 Papaver somniferum
PSO675G5262 Papaver somniferum
PSO675G9324 Papaver somniferum
PSO832G1277 Papaver somniferum
QL08p010315 Quercus lobata
QL08p010320 Quercus lobata
RcHm_v2.0_Chr5g0039431 Rosa chinensis
RhsimUnG0250600 Rhododendron simsii
Sabra11G0125500 Salix brachista
SalBow5G2755 Salvia bowleyana
Sc16g0006050 Simmondsia chinensis
Sed0017183 Sechium edule
SEGI_20110 Sequoiadendron giganteum
SGA_v2.0_scaffold347G49550 Striga asiatica
SHI26611 Sapria himalayana
SMO201G0052 Selaginella moellendorffii
Solyc07g064590.3 Solanum lycopersicum
Sopen07g032780 Solanum pennellii
Sp1g37520 Schrenkiella parvula
TAR626G1058 Trochodendron aralioides
THA.LOC104816937 Tarenaya hassleriana
Thecc.07G036900 Theobroma cacao
Thhalv10011780m.g Eutrema salsugineum
TPR.G1184 Trifolium pratense
TWI38G1854 Tripterygium wilfordii
TWI39G1048 Tripterygium wilfordii
unitig_746.g26546 Utricularia gibba
vmacro09715 Vaccinium macrocarpon
VMungo0647G0583 Vigna mungo
Zm00001eb207490 Zea mays

User provided reference genes

Program Settings