Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p30000 Brassica napus
Aa31LG7G3870 Aethionema arabicum
Actinidia30236 Actinidia chinensis
Actinidia39642 Actinidia chinensis
Ah.09g229250 Amaranthus hybridus
Ah.14g084750 Amaranthus hybridus
AL1G31710 Arabidopsis lyrata
Aqoxy7G04191 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea
AT1G19130 Arabidopsis thaliana
ATR0006G060 Amborella trichopoda
Atru.chr7.1733 Acer truncatum
AUR62025276 Chenopodium quinoa
AUR62025298 Chenopodium quinoa
AUR62028278 Chenopodium quinoa
AUR62028304 Chenopodium quinoa
BcaB02g10882 Brassica carinata
BcaB03g12935 Brassica carinata
BcaC07g38980 Brassica carinata
BolC8t49541H Brassica oleracea
BraA08t34935Z Brassica rapa
C08p19220 Brassica napus
CAN.G1661.20 Capsicum annuum
CANSAT56G0026 Cannabis sativa
CANSAT56G1413 Cannabis sativa
CANSAT56G1917 Cannabis sativa
CANSAT56G3530 Cannabis sativa
CARHR019730 Cardamine hirsuta
Carub.0001s1876 Capsella rubella
Ca_09309_v3 Cicer arietinum L.
Cc06_g12450 Coffea canephora
Cfa002967 Carpinus fangiana
Ciclev10009607m.g Citrus clementina
CiPaw.03G203800 Carya illinoinensis
ClCG03G014940 Citrullus lanatus
COL.COLO4_18072 Corchorus olitorius
Cpa.g.sc28.15 Carica papaya
CsaV3_1G041210 Cucumis sativus L.
CSS0016181 Camellia sinensis var. sinensis
CSS0028340 Camellia sinensis var. sinensis
DCAR_010492 Daucus carota
Dinv25540 Davidia involucrata
Duzib150G0101 Durio zibethinus
Duzib187G0940 Durio zibethinus
ECA236G2592 Erigeron canadensis
ECA236G4868 Erigeron canadensis
EL10Ac8g18996 Beta vulgaris
EL10Ac8g19027 Beta vulgaris
Eucgr.C00789 Eucalyptus grandis
Eucgr.C00790 Eucalyptus grandis
Eucgr.C03305 Eucalyptus grandis
FAN19G1369 Fragaria x ananassa
FAN23G1580 Fragaria x ananassa
FAN26G0065 Fragaria x ananassa
FAN26G3397 Fragaria x ananassa
FAN28G1197 Fragaria x ananassa
FvH4_1g09020 Fragaria vesca
Glyma.13G111600 Glycine max
Gohir.A05G034500 Gossypium hirsutum
Gohir.A06G078100 Gossypium hirsutum
Gohir.D05G035900 Gossypium hirsutum
Gohir.D06G077100 Gossypium hirsutum
Gorai.009G036500 Gossypium raimondii
Gorai.010G090200 Gossypium raimondii
GSVIVG01015050001 Vitis vinifera
HanXRQChr04g0125931 Helianthus annuus
HanXRQChr06g0168681 Helianthus annuus
Haze_26036 Corylus avellana
HPP92_004362 Vanilla planifolia
Hund26074 Selenicereus undatus
Hund26091 Selenicereus undatus
Lalb_Chr07g0181271 Lupinus albus
Lalb_Chr12g0200241 Lupinus albus
Lj4g0025093 Lotus japonicus
Lj7A688T82 Lonicera japonica
Lsat_1_v5_gn_8_85701 Lactuca sativa
Lsat_1_v5_gn_8_85721 Lactuca sativa
Manes.03G041800 Manihot esculenta
Mapoly0007s0060 Marchantia polymorpha
MBI13_g00698_MAGBIO Magnolia biondii
MBI13_g47248_MAGBIO Magnolia biondii
MBI14_g46913_MAGBIO Magnolia biondii
MBI19_g05291_MAGBIO Magnolia biondii
MD02G1095400 Malus domestica
Medtr4g125100 Medicago truncatula
MELO3C015534.2 Cucumis melo
Migut.L01579 Erythranthe guttata
MSTRG.26479 Avicennia marina
Nitab4.5_0000073g0300 Nicotiana tabacum
Nitab4.5_0004234g0030 Nicotiana tabacum
Nn5g27974 Nelumbo nucifera
Nn6g35681 Nelumbo nucifera
Oeu062247.1 Olea europaea
Os06g0198500 Oryza sativa ssp. japonica
Os06g0198600 Oryza sativa ssp. japonica
Os08g0455800 Oryza sativa ssp. japonica
Peaxi162Scf00928g00132 Petunia axillaris
PGR044G1997 Punica granatum
PGSC0003DMG400002903 Solanum tuberosum
Phvul.003G129600 Phaseolus vulgaris
Potri.006G140000 Populus trichocarpa
Pp3c9_22400 Physcomitrium patens
PRCOL_00002298 Prasinoderma coloniale
Prupe.7G195700 Prunus persica
Psat7g057800 Pisum sativum
QL11p001224 Quercus lobata
RcHm_v2.0_Chr2g0095441 Rosa chinensis
Rhsim05G0005100 Rhododendron simsii
Sabra06G0109300 Salix brachista
SalBow5G0266 Salvia bowleyana
Sc06g0006920 Simmondsia chinensis
Sc08g0009100 Simmondsia chinensis
Sed0027040 Sechium edule
SEGI_13235 Sequoiadendron giganteum
SGA_v2.0_scaffold296G47554 Striga asiatica
SMO340G0144 Selaginella moellendorffii
Solyc12g009180.2 Solanum lycopersicum
Sopen12g004130 Solanum pennellii
TAR624G1115 Trochodendron aralioides
THA.LOC104799837 Tarenaya hassleriana
Thecc.09G074200 Theobroma cacao
Thhalv10008865m.g Eutrema salsugineum
TPR.G12562 Trifolium pratense
TWI63G0883 Tripterygium wilfordii
vmacro17122 Vaccinium macrocarpon
VMungo1215G2404 Vigna mungo
Zm00001eb040490 Zea mays

User provided reference genes

Program Settings