Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26700 Brassica napus
Aa31LG1G13320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis
Actinidia31560 Actinidia chinensis
Ah.04g156800 Amaranthus hybridus
AL4G26880 Arabidopsis lyrata
AL6G33090 Arabidopsis lyrata
Aqoxy2G03817 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea
AT5G22110 Arabidopsis thaliana
ATR0598G269 Amborella trichopoda
Atru.chr3.1303 Acer truncatum
AUR62002056 Chenopodium quinoa
AUR62028170 Chenopodium quinoa
AUR62043421 Chenopodium quinoa
BcaB01g03058 Brassica carinata
BcaC01g04929 Brassica carinata
BolC3t15542H Brassica oleracea
BraA03t11882Z Brassica rapa
C03p31990 Brassica napus
CAN.G637.8 Capsicum annuum
CANSAT01G2997 Cannabis sativa
Carub.0006s1975 Capsella rubella
Ca_23674_v3 Cicer arietinum L.
Ca_31270_v3 Cicer arietinum L.
Cc04_g09090 Coffea canephora
CDE04G1443 Ceratophyllum demersum
CDE04G2185 Ceratophyllum demersum
CDE04G3312 Ceratophyllum demersum
CDE04G3394 Ceratophyllum demersum
Cfa020669 Carpinus fangiana
Cfa025039 Carpinus fangiana
Ciclev10019690m.g Citrus clementina
CiPaw.15G150200 Carya illinoinensis
ClCG04G012690 Citrullus lanatus
COL.COLO4_27108 Corchorus olitorius
Cpa.g.sc103.12 Carica papaya
Cre10.g424200 Chlamydomonas reinhardtii
CsaV3_1G032270 Cucumis sativus L.
CSS0011699 Camellia sinensis var. sinensis
CSS0024377 Camellia sinensis var. sinensis
DCAR_023267 Daucus carota
Dinv02367 Davidia involucrata
Duzib168G0906 Durio zibethinus
ECA238G0751 Erigeron canadensis
EL10Ac3g05085 Beta vulgaris
Eucgr.H00594 Eucalyptus grandis
FAN04G2119 Fragaria x ananassa
FAN08G2730 Fragaria x ananassa
FAN13G0892 Fragaria x ananassa
FAN18G1603 Fragaria x ananassa
FvH4_5g17980 Fragaria vesca
Glyma.09G169100 Glycine max
Glyma.16G218700 Glycine max
Gohir.A05G003900 Gossypium hirsutum
Gohir.D04G101160 Gossypium hirsutum
Gohir.D05G004300 Gossypium hirsutum
Gorai.009G004100 Gossypium raimondii
Gorai.009G404500 Gossypium raimondii
GSVIVG01008158001 Vitis vinifera
HanXRQChr05g0129721 Helianthus annuus
HanXRQChr05g0129731 Helianthus annuus
HanXRQChr11g0338971 Helianthus annuus
HanXRQChr11g0338981 Helianthus annuus
Haze_18963 Corylus avellana
HPP92_019162 Vanilla planifolia
Hund09784 Selenicereus undatus
Lalb_Chr22g0353691 Lupinus albus
Lalb_Chr22g0353701 Lupinus albus
Lj2g0014656 Lotus japonicus
Lj5A165T85 Lonicera japonica
Lsat_1_v5_gn_2_15241 Lactuca sativa
Manes.03G098800 Manihot esculenta
Mapoly0003s0120 Marchantia polymorpha
MCO14G014 Micromonas commoda
MD06G1235400 Malus domestica
MD14G1242400 Malus domestica
Medtr6g075170 Medicago truncatula
MELO3C001937.2 Cucumis melo
Migut.O00238 Erythranthe guttata
Nitab4.5_0001180g0190 Nicotiana tabacum
Nitab4.5_0005973g0040 Nicotiana tabacum
Nn2g11046 Nelumbo nucifera
Oeu019145.1 Olea europaea
Os05g0160800 Oryza sativa ssp. japonica
Peaxi162Scf00171g00431 Petunia axillaris
PGR083G2599 Punica granatum
PGSC0003DMG400031043 Solanum tuberosum
Phvul.004G144700 Phaseolus vulgaris
Potri.012G039300 Populus trichocarpa
Pp3c16_3220 Physcomitrium patens
PRCOL_00003367 Prasinoderma coloniale
Prupe.5G240100 Prunus persica
Prupe.8G055400 Prunus persica
Psat6g072600 Pisum sativum
PSO063G7422 Papaver somniferum
PSO782G5703 Papaver somniferum
QL10p033089 Quercus lobata
RcHm_v2.0_Chr7g0177621 Rosa chinensis
Rhsim06G0000100 Rhododendron simsii
Sabra12G0027800 Salix brachista
SalBow5G1258 Salvia bowleyana
Sc10g0008900 Simmondsia chinensis
Sed0010232 Sechium edule
SEGI_25528 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27775 Striga asiatica
SHI32102 Sapria himalayana
SMO089G0008 Selaginella moellendorffii
SMO200G0091 Selaginella moellendorffii
Solyc03g098250.4 Solanum lycopersicum
Sopen03g028960 Solanum pennellii
SpUn0288_0010 Schrenkiella parvula
TAR622G0246 Trochodendron aralioides
THA.LOC104810934 Tarenaya hassleriana
Thecc.03G068300 Theobroma cacao
Thecc.04G242900 Theobroma cacao
Thecc.10G092900 Theobroma cacao
Thhalv10001961m.g Eutrema salsugineum
TPR.G28014 Trifolium pratense
TPR.G28017 Trifolium pratense
TWI60G0630 Tripterygium wilfordii
unitig_0.g1094 Utricularia gibba
vmacro01251 Vaccinium macrocarpon
vmacro03513 Vaccinium macrocarpon
VMungo0464G1920 Vigna mungo
VMungo1215G0683 Vigna mungo
Zm00001eb037700 Zea mays

User provided reference genes

Program Settings