Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p49770 Brassica napus
Aa31LG10G11760 Aethionema arabicum
Actinidia17973 Actinidia chinensis
AL5G38300 Arabidopsis lyrata
Aqoxy3G01734 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea
AT3G56900 Arabidopsis thaliana
ATR0307G100 Amborella trichopoda
ATR0307G134 Amborella trichopoda
Atru.chr1.1516 Acer truncatum
AUR62018437 Chenopodium quinoa
AUR62020996 Chenopodium quinoa
BcaC07g40002 Brassica carinata
BcaC07g40109 Brassica carinata
BolC8t50833H Brassica oleracea
BraA09t40430Z Brassica rapa
C08p32150 Brassica napus
CANSAT64G0701 Cannabis sativa
CARHR167050 Cardamine hirsuta
Carub.0005s2364 Capsella rubella
Ca_08352_v3 Cicer arietinum L.
CBR_g54315 Chara braunii
Cc06_g22820 Coffea canephora
CDE02G3082 Ceratophyllum demersum
Cfa019941 Carpinus fangiana
Ciclev10011725m.g Citrus clementina
CiPaw.10G124100 Carya illinoinensis
ClCG10G016510 Citrullus lanatus
Cpa.g.sc33.197 Carica papaya
Cre10.g466300 Chlamydomonas reinhardtii
CsaV3_3G039830 Cucumis sativus L.
CSS0033436 Camellia sinensis var. sinensis
Dinv10196 Davidia involucrata
Duzib106G1718 Durio zibethinus
ECA247G0085 Erigeron canadensis
EL10Ac3g07343 Beta vulgaris
Eucgr.K01689 Eucalyptus grandis
FAN01G1644 Fragaria x ananassa
FAN03G1994 Fragaria x ananassa
FAN06G1001 Fragaria x ananassa
FAN10G0117 Fragaria x ananassa
FvH4_7g04320 Fragaria vesca
Glyma.03G120400 Glycine max
Glyma.19G125000 Glycine max
Gohir.A11G305400 Gossypium hirsutum
Gohir.D11G320800 Gossypium hirsutum
Gorai.007G351000 Gossypium raimondii
GSVIVG01025850001 Vitis vinifera
GSVIVG01025851001 Vitis vinifera
HanXRQChr14g0457301 Helianthus annuus
Haze_20298 Corylus avellana
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla
HPP92_002168 Vanilla planifolia
HPP92_002170 Vanilla planifolia
Hund19061 Selenicereus undatus
Lalb_Chr22g0357991 Lupinus albus
Lalb_Chr22g0358001 Lupinus albus
Lj1A24G66 Lonicera japonica
Lj1A24G67 Lonicera japonica
Lj1g0020171 Lotus japonicus
Lj2A730T35 Lonicera japonica
Lj2A730T36 Lonicera japonica
Lsat_1_v5_gn_4_93961 Lactuca sativa
Lsat_1_v5_gn_9_32341 Lactuca sativa
Manes.10G077600 Manihot esculenta
Mapoly0010s0124 Marchantia polymorpha
MBI19_g25019_MAGBIO Magnolia biondii
MCO12G281 Micromonas commoda
MD12G1112000 Malus domestica
MD14G1101000 Malus domestica
MD14G1101100 Malus domestica
Medtr7g088540 Medicago truncatula
MELO3C009724.2 Cucumis melo
Migut.K00169 Erythranthe guttata
MSTRG.10773 Avicennia marina
Nitab4.5_0000211g0120 Nicotiana tabacum
Nitab4.5_0000211g0140 Nicotiana tabacum
Nitab4.5_0000275g0010 Nicotiana tabacum
Nitab4.5_0003840g0020 Nicotiana tabacum
Nitab4.5_0003840g0030 Nicotiana tabacum
Oeu060754.2 Olea europaea
Os11g0132700 Oryza sativa ssp. japonica
Os12g0129400 Oryza sativa ssp. japonica
Os12g0129650 Oryza sativa ssp. japonica
Os12g0131300 Oryza sativa ssp. japonica
Peaxi162Scf00937g00117 Petunia axillaris
PGR142G0634 Punica granatum
PGSC0003DMG400017881 Solanum tuberosum
Phvul.001G116600 Phaseolus vulgaris
Potri.016G030400 Populus trichocarpa
Pp3c11_18220 Physcomitrium patens
PRCOL_00002577 Prasinoderma coloniale
Prupe.7G021600 Prunus persica
Psat3g082320 Pisum sativum
PSO541G4485 Papaver somniferum
PSO675G1003 Papaver somniferum
QL07p014493 Quercus lobata
QL07p014498 Quercus lobata
RcHm_v2.0_Chr1g0329271 Rosa chinensis
RcHm_v2.0_Chr1g0329281 Rosa chinensis
RhsimUnG0020600 Rhododendron simsii
Sabra16G0033900 Salix brachista
SalBow1G0987 Salvia bowleyana
Sc19g0007880 Simmondsia chinensis
Sed0007984 Sechium edule
SEGI_22413 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30556 Striga asiatica
SMO069G0001 Selaginella moellendorffii
SMO116G0186 Selaginella moellendorffii
SMO133G0039 Selaginella moellendorffii
Solyc08g016801.1 Solanum lycopersicum
Solyc08g016808.1 Solanum lycopersicum
Solyc08g036600.3 Solanum lycopersicum
Sopen08g011280 Solanum pennellii
Sp5g05690 Schrenkiella parvula
TAR623G0939 Trochodendron aralioides
TAR623G0990 Trochodendron aralioides
THA.LOC104814894 Tarenaya hassleriana
Thecc.05G131000 Theobroma cacao
Thhalv10005968m.g Eutrema salsugineum
TPR.G27968 Trifolium pratense
TWI74G0774 Tripterygium wilfordii
unitig_46.g18486 Utricularia gibba
vmacro07758 Vaccinium macrocarpon
VMungo0331G1996 Vigna mungo
VMungo1383G1641 Vigna mungo
Zm00001eb405260 Zea mays

User provided reference genes

Program Settings