Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p32230 Brassica napus
A09p62650 Brassica napus
Aa31LG1G1130 Aethionema arabicum
Aa31LG2G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis
AL1G25700 Arabidopsis lyrata
Aqoxy6G00083 Aquilegia oxysepala
AT1G13870 Arabidopsis thaliana
ATR1136G145 Amborella trichopoda
Atru.chr11.1655 Acer truncatum
AUR62007931 Chenopodium quinoa
AUR62013291 Chenopodium quinoa
BcaB03g13127 Brassica carinata
BcaB08g34333 Brassica carinata
BcaC07g38705 Brassica carinata
BcaC07g41617 Brassica carinata
BolC8t49259H Brassica oleracea
BolC8t52170H Brassica oleracea
BraA08t35146Z Brassica rapa
BraA09t41629Z Brassica rapa
C08p16350 Brassica napus
C08p46210 Brassica napus
CAN.G792.64 Capsicum annuum
CANSAT64G1447 Cannabis sativa
CANSAT64G3010 Cannabis sativa
CARHR014240 Cardamine hirsuta
Carub.0001s1357 Capsella rubella
CBR_g32247 Chara braunii
Cc11_g12150 Coffea canephora
CDE04G1019 Ceratophyllum demersum
Cfa026301 Carpinus fangiana
Ciclev10032231m.g Citrus clementina
CiPaw.06G091600 Carya illinoinensis
ClCG08G010310 Citrullus lanatus
COL.COLO4_27903 Corchorus olitorius
Cpa.g.sc1.112 Carica papaya
Cre17.g711050 Chlamydomonas reinhardtii
CsaV3_6G032530 Cucumis sativus L.
CsaV3_6G033610 Cucumis sativus L.
CSS0045883 Camellia sinensis var. sinensis
DCAR_030035 Daucus carota
Dinv16720 Davidia involucrata
Dinv34082 Davidia involucrata
Duzib251G0397 Durio zibethinus
Duzib268G0538 Durio zibethinus
ECA246G3492 Erigeron canadensis
EL10Ac6g14988 Beta vulgaris
Eucgr.G02457 Eucalyptus grandis
FAN07G2159 Fragaria x ananassa
FAN12G3645 Fragaria x ananassa
FAN17G2903 Fragaria x ananassa
FAN22G2161 Fragaria x ananassa
FvH4_4g30260 Fragaria vesca
Glyma.03G009300 Glycine max
Glyma.07G070800 Glycine max
Gohir.A03G103900 Gossypium hirsutum
Gohir.D02G129100 Gossypium hirsutum
Gorai.005G144800 Gossypium raimondii
HanXRQChr12g0375331 Helianthus annuus
HanXRQChr13g0417131 Helianthus annuus
Haze_11974 Corylus avellana
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla
HPP92_017676 Vanilla planifolia
HPP92_017746 Vanilla planifolia
Lalb_Chr10g0096961 Lupinus albus
Lalb_Chr17g0339631 Lupinus albus
Lj3g0000255 Lotus japonicus
Lj6P780T42 Lonicera japonica
Lsat_1_v5_gn_2_78301 Lactuca sativa
Lsat_1_v5_gn_3_56041 Lactuca sativa
Manes.07G067750 Manihot esculenta
Manes.07G067800 Manihot esculenta
Mapoly0008s0061 Marchantia polymorpha
MBI03_g07691_MAGBIO Magnolia biondii
MCO02G221 Micromonas commoda
MD16G1062500 Malus domestica
Medtr8g030830 Medicago truncatula
Medtr8g446960 Medicago truncatula
MELO3C011427.2 Cucumis melo
Migut.L01201 Erythranthe guttata
MSTRG.745 Avicennia marina
Nitab4.5_0000100g0120 Nicotiana tabacum
Nitab4.5_0000607g0040 Nicotiana tabacum
Nn3g17430 Nelumbo nucifera
Oeu004576.4 Olea europaea
Oeu025274.1 Olea europaea
Os11g0312340 Oryza sativa ssp. japonica
Peaxi162Scf00155g00910 Petunia axillaris
PGR119G0479 Punica granatum
PGSC0003DMG400005786 Solanum tuberosum
Phvul.010G098900 Phaseolus vulgaris
Phvul.011G076500 Phaseolus vulgaris
Potri.008G094600 Populus trichocarpa
Pp3c10_170 Physcomitrium patens
Pp3c8_25320 Physcomitrium patens
PRCOL_00001916 Prasinoderma coloniale
Prupe.1G285000 Prunus persica
Psat4g154880 Pisum sativum
PSO017G0525 Papaver somniferum
PSO170G2502 Papaver somniferum
QL03p071327 Quercus lobata
RcHm_v2.0_Chr4g0438561 Rosa chinensis
Rhsim08G0202600 Rhododendron simsii
Sabra08G0071100 Salix brachista
Sabra10G0121200 Salix brachista
SalBow2G1772 Salvia bowleyana
SalBow2G2095 Salvia bowleyana
SalBow6G2218 Salvia bowleyana
SalBow6G7020 Salvia bowleyana
Sc04g0007660 Simmondsia chinensis
Sed0023480 Sechium edule
SEGI_02005 Sequoiadendron giganteum
SEGI_31918 Sequoiadendron giganteum
SGA_v2.0_scaffold308G48068 Striga asiatica
SGA_v2.0_scaffold36G14447 Striga asiatica
SHI21260 Sapria himalayana
SMO115G0347 Selaginella moellendorffii
Solyc08g008250.3 Solanum lycopersicum
Sopen08g004100 Solanum pennellii
Sp1g12090 Schrenkiella parvula
TAR374G0384 Trochodendron aralioides
TAR622G1353 Trochodendron aralioides
THA.LOC104824063 Tarenaya hassleriana
Thecc.02G333100 Theobroma cacao
TPR.G19440 Trifolium pratense
unitig_22.g6497 Utricularia gibba
vmacro19077 Vaccinium macrocarpon
VMungo0331G1135 Vigna mungo
Zm00001eb298610 Zea mays

User provided reference genes

Program Settings