Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p24790 Brassica napus
Aa31LG2G13450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.790 Anthoceros agrestis
Ah.12g054610 Amaranthus hybridus
AL1G46750 Arabidopsis lyrata
Aqoxy3G00478 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C9Y7N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LSM77P Arachis hypogaea
AT1G32500 Arabidopsis thaliana
ATR0680G232 Amborella trichopoda
Atru.chr6.1754 Acer truncatum
AUR62007248 Chenopodium quinoa
AUR62018750 Chenopodium quinoa
AUR62018751 Chenopodium quinoa
AUR62019423 Chenopodium quinoa
BcaB03g13726 Brassica carinata
BcaC05g27849 Brassica carinata
BcaC05g27850 Brassica carinata
BolC5t32582H Brassica oleracea
BraA05t21362Z Brassica rapa
C05p38480 Brassica napus
CAN.G845.35 Capsicum annuum
CANSAT21G0754 Cannabis sativa
CARHR031950 Cardamine hirsuta
Carub.0001s3091 Capsella rubella
Ca_24644_v3 Cicer arietinum L.
CBR_g5705 Chara braunii
CBR_g5706 Chara braunii
Cc08_g02430 Coffea canephora
Cfa012411 Carpinus fangiana
Ciclev10031360m.g Citrus clementina
CiPaw.11G091200 Carya illinoinensis
ClCG09G012180 Citrullus lanatus
ClCG09G012190 Citrullus lanatus
COL.COLO4_17073 Corchorus olitorius
Cpa.g.c32163 Carica papaya
Cpa.g.sc90.55 Carica papaya
Cre12.g513950 Chlamydomonas reinhardtii
CsaV3_3G049370 Cucumis sativus L.
CSS0010269 Camellia sinensis var. sinensis
CSS0019238 Camellia sinensis var. sinensis
CSS0023186 Camellia sinensis var. sinensis
DCAR_008285 Daucus carota
Dinv28932 Davidia involucrata
Duzib205G1867 Durio zibethinus
ECA246G3200 Erigeron canadensis
EL10Ac1g02288 Beta vulgaris
Eucgr.E00301 Eucalyptus grandis
FAN02G2000 Fragaria x ananassa
FAN05G0306 Fragaria x ananassa
FAN09G0007 Fragaria x ananassa
FvH4_6g31710 Fragaria vesca
Glyma.01G199500 Glycine max
Glyma.11G042400 Glycine max
Gohir.A08G158300 Gossypium hirsutum
Gohir.D08G178600 Gossypium hirsutum
Gorai.004G186900 Gossypium raimondii
GSVIVG01013180001 Vitis vinifera
GSVIVG01015822001 Vitis vinifera
HanXRQChr06g0167341 Helianthus annuus
HanXRQChr17g0535731 Helianthus annuus
Haze_08267 Corylus avellana
HPP92_003349 Vanilla planifolia
Hund14417 Selenicereus undatus
Lalb_Chr05g0214021 Lupinus albus
Lj2g0019507 Lotus japonicus
Lj8A291G57 Lonicera japonica
Lsat_1_v5_gn_3_16601 Lactuca sativa
Manes.05G117026 Manihot esculenta
Mapoly0097s0089 Marchantia polymorpha
MBI18_g17018_MAGBIO Magnolia biondii
MCO11G391 Micromonas commoda
MD09G1232600 Malus domestica
Medtr5g014290 Medicago truncatula
MELO3C003388.2 Cucumis melo
MELO3C003389.2 Cucumis melo
Migut.E01131 Erythranthe guttata
MSTRG.12007 Avicennia marina
Nitab4.5_0000535g0010 Nicotiana tabacum
Nitab4.5_0000804g0060 Nicotiana tabacum
Nn3g17324 Nelumbo nucifera
Oeu062745.2 Olea europaea
Os01g0127300 Oryza sativa ssp. japonica
Peaxi162Scf00102g00639 Petunia axillaris
PGR042G1735 Punica granatum
PGSC0003DMG400020501 Solanum tuberosum
Phvul.002G006200 Phaseolus vulgaris
Potri.001G144500 Populus trichocarpa
Potri.003G089700 Populus trichocarpa
Pp3c12_11290 Physcomitrium patens
Pp3c4_5260 Physcomitrium patens
PRCOL_00003470 Prasinoderma coloniale
Prupe.1G552500 Prunus persica
Psat2g173560 Pisum sativum
PSO017G4443 Papaver somniferum
PSO478G2563 Papaver somniferum
PSO478G3605 Papaver somniferum
PSO782G1575 Papaver somniferum
QL12p004317 Quercus lobata
QL12p006235 Quercus lobata
RcHm_v2.0_Chr6g0269051 Rosa chinensis
Rhsim07G0124800 Rhododendron simsii
Sabra01G0112900 Salix brachista
Sabra03G0059600 Salix brachista
SalBow1G7584 Salvia bowleyana
Sc22g0001480 Simmondsia chinensis
Sed0023119 Sechium edule
Sed0027774 Sechium edule
SEGI_13135 Sequoiadendron giganteum
SGA_v2.0_scaffold385G50460 Striga asiatica
SMO356G0179 Selaginella moellendorffii
Solyc08g007010.4 Solanum lycopersicum
Sopen08g002980 Solanum pennellii
Sp1g28400 Schrenkiella parvula
TAR371G0010 Trochodendron aralioides
TAR371G1082 Trochodendron aralioides
THA.LOC104807962 Tarenaya hassleriana
THA.LOC104814434 Tarenaya hassleriana
Thecc.03G231000 Theobroma cacao
Thhalv10007401m.g Eutrema salsugineum
TPR.G17447 Trifolium pratense
TPR.G7828 Trifolium pratense
TWI60G1370 Tripterygium wilfordii
TWI81G0082 Tripterygium wilfordii
unitig_52.g17240 Utricularia gibba
vmacro14161 Vaccinium macrocarpon
VMungo0540G2353 Vigna mungo
VMungo1215G1026 Vigna mungo
Zm00001eb335220 Zea mays

User provided reference genes

Program Settings