Gene: Sopen08g002980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g002980
  • Transcript Identifier Sopen08g002980.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 1779490-1784611 : negative

Gene Family Information

  • ID HOM05D006113
  • #Genes/#Species 129/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g002980.1

Descriptions

  • Description Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data. | non-intrinsic ABC protein 6 (NAP6) | CONTAINS InterPro DOMAIN/s: SUF system FeS cluster assembly, SufBD | BEST Arabidopsis thaliana protein match is: ATP binding cassette protein 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016226
IEA
InterProiron-sulfur cluster assembly
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G32500
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT1G32500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G32500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G32500
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G32500
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G32500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000825 SUF system FeS cluster assembly, SufBD
IPR037284 SUF system FeS cluster assembly, SufBD superfamily
IPR011542 SUF system FeS cluster assembly, SufD
Mapman id Description
7.11.1.1.1.3 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.assembly phase.SUF-BCD scaffold complex.component SUF-D