Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p24010 Brassica napus
Aa31LG11G14800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.925 Anthoceros agrestis
AL6G25430 Arabidopsis lyrata
Aqoxy3G01052 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9SWD85 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MW1879 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0D599 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAGP4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE4L3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z1T37B Arachis hypogaea
AT5G14660 Arabidopsis thaliana
ATR1091G073 Amborella trichopoda
Atru.chr6.2325 Acer truncatum
AUR62001047 Chenopodium quinoa
AUR62004904 Chenopodium quinoa
AUR62032756 Chenopodium quinoa
BolC9t59085H Brassica oleracea
BraA10t44464Z Brassica rapa
C09p62480 Brassica napus
CAN.G206.14 Capsicum annuum
CANSAT64G2896 Cannabis sativa
CARHR198660 Cardamine hirsuta
Carub.0006s1283 Capsella rubella
Ca_06582_v3 Cicer arietinum L.
CBR_g10865 Chara braunii
CBR_g11073 Chara braunii
Cc00_g04250 Coffea canephora
CDE02G3642 Ceratophyllum demersum
Cfa007410 Carpinus fangiana
Ciclev10016231m.g Citrus clementina
CiPaw.03G040100 Carya illinoinensis
ClCG10G014090 Citrullus lanatus
COL.COLO4_29012 Corchorus olitorius
Cpa.g.sc108.27 Carica papaya
Cre01.g039650 Chlamydomonas reinhardtii
Cre01.g039750 Chlamydomonas reinhardtii
CsaV3_3G042570 Cucumis sativus L.
CSS0016858 Camellia sinensis var. sinensis
CSS0029342 Camellia sinensis var. sinensis
CSS0036441 Camellia sinensis var. sinensis
CSS0045399 Camellia sinensis var. sinensis
DCAR_011234 Daucus carota
Dinv35082 Davidia involucrata
Duzib187G0986 Durio zibethinus
ECA238G0132 Erigeron canadensis
EL10Ac4g09089 Beta vulgaris
Eucgr.I01778 Eucalyptus grandis
FAN02G3346 Fragaria x ananassa
FAN09G4447 Fragaria x ananassa
FAN14G3710 Fragaria x ananassa
FvH4_6g50950 Fragaria vesca
Glyma.19G061900 Glycine max
Glyma.19G115400 Glycine max
Gohir.A10G103100 Gossypium hirsutum
Gohir.D10G087300 Gossypium hirsutum
Gorai.011G095500 Gossypium raimondii
GSVIVG01032450001 Vitis vinifera
HanXRQChr14g0450421 Helianthus annuus
Haze_14694 Corylus avellana
Hma1.2p1_0993F.1_g245320 Hydrangea macrophylla
HPP92_016006 Vanilla planifolia
HPP92_016014 Vanilla planifolia
HPP92_016020 Vanilla planifolia
HPP92_016034 Vanilla planifolia
Hund06951 Selenicereus undatus
Lalb_Chr10g0093951 Lupinus albus
Lj1g0027893 Lotus japonicus
Lj7A594G50 Lonicera japonica
Manes.17G113300 Manihot esculenta
Mapoly0058s0077 Marchantia polymorpha
MBI16_g27082_MAGBIO Magnolia biondii
MCO01G286 Micromonas commoda
MD09G1030300 Malus domestica
MD17G1032100 Malus domestica
Medtr7g035310 Medicago truncatula
MELO3C009968.2 Cucumis melo
Migut.K01380 Erythranthe guttata
MSTRG.3294 Avicennia marina
Nitab4.5_0002739g0120 Nicotiana tabacum
Nitab4.5_0008215g0030 Nicotiana tabacum
Nn4g22741 Nelumbo nucifera
Oeu043040.1 Olea europaea
Os01g0636600 Oryza sativa ssp. japonica
Os01g0637600 Oryza sativa ssp. japonica
Peaxi162Scf00129g01227 Petunia axillaris
PGR142G0249 Punica granatum
PGSC0003DMG400000518 Solanum tuberosum
Phvul.004G149800 Phaseolus vulgaris
Potri.001G346700 Populus trichocarpa
Pp3c24_20 Physcomitrium patens
PRCOL_00005209 Prasinoderma coloniale
Prupe.3G287100 Prunus persica
Psat3g166600 Pisum sativum
QL02p075892 Quercus lobata
RcHm_v2.0_Chr2g0172351 Rosa chinensis
Rhsim10G0019600 Rhododendron simsii
Sabra16G0225600 Salix brachista
Sabra16G0226300 Salix brachista
SalBow5G0229 Salvia bowleyana
SalBow5G1807 Salvia bowleyana
SalBow5G2697 Salvia bowleyana
SalBow5G4602 Salvia bowleyana
SalBow7G1007 Salvia bowleyana
Sc16g0003340 Simmondsia chinensis
Sed0024403 Sechium edule
SEGI_02624 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12428 Striga asiatica
SGA_v2.0_scaffold30G12431 Striga asiatica
SHI22178 Sapria himalayana
SMO111G0051 Selaginella moellendorffii
SMO111G0178 Selaginella moellendorffii
SMO347G0147 Selaginella moellendorffii
SMO347G0192 Selaginella moellendorffii
SMO347G0426 Selaginella moellendorffii
SMO347G0494 Selaginella moellendorffii
Solyc02g086680.4 Solanum lycopersicum
Sopen02g031440 Solanum pennellii
Sp6g29380 Schrenkiella parvula
TAR622G0841 Trochodendron aralioides
TAR629G1761 Trochodendron aralioides
THA.LOC104822396 Tarenaya hassleriana
Thecc.04G012100 Theobroma cacao
Thhalv10014367m.g Eutrema salsugineum
TPR.G9075 Trifolium pratense
unitig_748.g8596 Utricularia gibba
vmacro05842 Vaccinium macrocarpon
VMungo0464G1588 Vigna mungo
Zm00001eb359100 Zea mays

User provided reference genes

Program Settings