Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p04190 Brassica napus
Aa31LG10G10820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.253 Anthoceros agrestis
Actinidia21518 Actinidia chinensis
Ah.12g062830 Amaranthus hybridus
AL5G37140 Arabidopsis lyrata
Aqoxy2G00367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HF4B4K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RMFD7W Arachis hypogaea
AT3G55850 Arabidopsis thaliana
ATR0745G019 Amborella trichopoda
Atru.chr7.628 Acer truncatum
AUR62026861 Chenopodium quinoa
AUR62032650 Chenopodium quinoa
AUR62037188 Chenopodium quinoa
BcaB02g08396 Brassica carinata
BcaC02g09793 Brassica carinata
BolC4t25143H Brassica oleracea
BraA04t16135Z Brassica rapa
C04p36530 Brassica napus
CAN.G176.2 Capsicum annuum
CANSAT56G2143 Cannabis sativa
CARHR165960 Cardamine hirsuta
Carub.0002s2671 Capsella rubella
Carub.0005s2263 Capsella rubella
Ca_03883_v3 Cicer arietinum L.
Ca_26912_v3 Cicer arietinum L.
Ca_29040_v3 Cicer arietinum L.
Cc02_g30220 Coffea canephora
CDE04G3686 Ceratophyllum demersum
CDE06G0927 Ceratophyllum demersum
CDE06G1230 Ceratophyllum demersum
CDE06G1678 Ceratophyllum demersum
CDE06G2151 Ceratophyllum demersum
Cfa010917 Carpinus fangiana
Ciclev10004623m.g Citrus clementina
CiPaw.14G007600 Carya illinoinensis
ClCG05G026810 Citrullus lanatus
COL.COLO4_20657 Corchorus olitorius
Cre06.g279350 Chlamydomonas reinhardtii
Cre07.g313350 Chlamydomonas reinhardtii
CsaV3_5G036770 Cucumis sativus L.
CSS0004732 Camellia sinensis var. sinensis
DCAR_031236 Daucus carota
DCAR_031243 Daucus carota
DCAR_031244 Daucus carota
Dinv22036 Davidia involucrata
Duzib114G0946 Durio zibethinus
ECA236G3136 Erigeron canadensis
EL10Ac2g02801 Beta vulgaris
Eucgr.G03235 Eucalyptus grandis
FAN01G0546 Fragaria x ananassa
FAN10G0529 Fragaria x ananassa
FvH4_7g03070 Fragaria vesca
Glyma.13G197200 Glycine max
Glyma.15G235400 Glycine max
Gohir.A06G175000 Gossypium hirsutum
Gohir.D06G184900 Gossypium hirsutum
Gorai.010G216200 Gossypium raimondii
GSVIVG01013488001 Vitis vinifera
HanXRQChr04g0113861 Helianthus annuus
Haze_03039 Corylus avellana
Hma1.2p1_0269F.1_g107740 Hydrangea macrophylla
Hma1.2p1_1627F.1_g294440 Hydrangea macrophylla
Hma1.2p1_1627F.1_g294450 Hydrangea macrophylla
Hma1.2p1_3244F.1_g334325 Hydrangea macrophylla
HPP92_013975 Vanilla planifolia
Hund13358 Selenicereus undatus
Lalb_Chr19g0132421 Lupinus albus
Lj3g0013868 Lotus japonicus
Lj9A654G51 Lonicera japonica
Lj9A654T55 Lonicera japonica
Lsat_1_v5_gn_7_31901 Lactuca sativa
Manes.04G159300 Manihot esculenta
Mapoly0021s0162 Marchantia polymorpha
MBI19_g07612_MAGBIO Magnolia biondii
MCO06G284 Micromonas commoda
MD07G1040200 Malus domestica
Medtr1224s0010 Medicago truncatula
Medtr3g014750 Medicago truncatula
MELO3C012474.2 Cucumis melo
Migut.N01845 Erythranthe guttata
Nitab4.5_0001621g0010 Nicotiana tabacum
Nn2g14836 Nelumbo nucifera
Nn2g16009 Nelumbo nucifera
Nn313s46297 Nelumbo nucifera
Oeu048573.1 Olea europaea
Os01g0952700 Oryza sativa ssp. japonica
Peaxi162Scf00767g00518 Petunia axillaris
PGR031G1965 Punica granatum
PGSC0003DMG400025223 Solanum tuberosum
Phvul.011G206500 Phaseolus vulgaris
Potri.003G196300 Populus trichocarpa
Pp3c20_1490 Physcomitrium patens
Pp3s32_630 Physcomitrium patens
PRCOL_00004985 Prasinoderma coloniale
PRCOL_00006109 Prasinoderma coloniale
Prupe.2G036100 Prunus persica
Psat5g221440 Pisum sativum
PSO339G1331 Papaver somniferum
QL04p017840 Quercus lobata
QL04p017846 Quercus lobata
QL04p017855 Quercus lobata
RcHm_v2.0_Chr1g0324291 Rosa chinensis
RcHm_v2.0_Chr6g0254811 Rosa chinensis
Sabra03G0146400 Salix brachista
SalBow6G4726 Salvia bowleyana
Sc07g0002170 Simmondsia chinensis
Sed0002543 Sechium edule
SEGI_19069 Sequoiadendron giganteum
SEGI_33421 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43504 Striga asiatica
SMO005G0015 Selaginella moellendorffii
SMO367G0062 Selaginella moellendorffii
SMO367G1089 Selaginella moellendorffii
Solyc08g014470.4 Solanum lycopersicum
Sopen08g005450 Solanum pennellii
Sp5g06630 Schrenkiella parvula
TAR623G0406 Trochodendron aralioides
TAR623G0702 Trochodendron aralioides
THA.LOC104826726 Tarenaya hassleriana
Thecc.10G154600 Theobroma cacao
Thhalv10010237m.g Eutrema salsugineum
Thhalv10010899m.g Eutrema salsugineum
TPR.G17806 Trifolium pratense
unitig_52.g17390 Utricularia gibba
vmacro12697 Vaccinium macrocarpon
VMungo1127G1548 Vigna mungo
VMungo1127G1698 Vigna mungo
Zm00001eb140700 Zea mays

User provided reference genes

Program Settings