Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p23350 Brassica napus
A09p23360 Brassica napus
Aa31LG4G130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4090 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4095 Anthoceros agrestis
Actinidia13476 Actinidia chinensis
Actinidia21680 Actinidia chinensis
Actinidia32730 Actinidia chinensis
Actinidia35657 Actinidia chinensis
Ah.01g005550 Amaranthus hybridus
Ah.01g021630 Amaranthus hybridus
AL2G41710 Arabidopsis lyrata
Aqoxy7G01608 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MEX591 Arachis hypogaea
AT1G79850 Arabidopsis thaliana
ATR0693G299 Amborella trichopoda
AUR62011660 Chenopodium quinoa
AUR62016483 Chenopodium quinoa
BcaB07g30746 Brassica carinata
BcaC04g21589 Brassica carinata
BcaC04g21590 Brassica carinata
BolC9t55874H Brassica oleracea
BolC9t55875H Brassica oleracea
BraA09t37936Z Brassica rapa
BraA09t37937Z Brassica rapa
C09p30100 Brassica napus
C09p30110 Brassica napus
CAN.G438.28 Capsicum annuum
CANSAT56G1509 Cannabis sativa
CARHR074660 Cardamine hirsuta
Carub.0002s2765 Capsella rubella
Ca_01132_v3 Cicer arietinum L.
CBR_g33913 Chara braunii
Cc04_g03040 Coffea canephora
CDE04G2099 Ceratophyllum demersum
Cfa002095 Carpinus fangiana
Ciclev10026679m.g Citrus clementina
CiPaw.02G148800 Carya illinoinensis
ClCG09G001940 Citrullus lanatus
COL.COLO4_30435 Corchorus olitorius
Cpa.g.sc98.5 Carica papaya
CsaV3_7G033420 Cucumis sativus L.
CSS0001890 Camellia sinensis var. sinensis
CSS0016455 Camellia sinensis var. sinensis
CSS0034695 Camellia sinensis var. sinensis
CSS0048088 Camellia sinensis var. sinensis
DCAR_016211 Daucus carota
Dinv38021 Davidia involucrata
Duzib160G0510 Durio zibethinus
Duzib235G0379 Durio zibethinus
EL10Ac9g22030 Beta vulgaris
Eucgr.F03039 Eucalyptus grandis
FAN02G0676 Fragaria x ananassa
FAN05G4262 Fragaria x ananassa
FAN09G1878 Fragaria x ananassa
FAN14G0180 Fragaria x ananassa
FAN14G1929 Fragaria x ananassa
FvH4_6g31770 Fragaria vesca
Glyma.13G357200 Glycine max
Glyma.15G016400 Glycine max
Gohir.A05G131800 Gossypium hirsutum
Gohir.A10G081300 Gossypium hirsutum
Gohir.D05G131300 Gossypium hirsutum
Gohir.D10G070100 Gossypium hirsutum
Gorai.009G135000 Gossypium raimondii
Gorai.011G074400 Gossypium raimondii
GSVIVG01017072001 Vitis vinifera
HanXRQChr12g0360791 Helianthus annuus
Haze_16361 Corylus avellana
Hma1.2p1_1195F.1_g265790 Hydrangea macrophylla
Hma1.2p1_3147F.1_g333156 Hydrangea macrophylla
Lalb_Chr22g0351371 Lupinus albus
Lj3g0008796 Lotus japonicus
Lj5C58T14 Lonicera japonica
Lsat_1_v5_gn_5_130940 Lactuca sativa
Manes.04G130000 Manihot esculenta
Mapoly0027s0119 Marchantia polymorpha
MBI09_g14014_MAGBIO Magnolia biondii
MCO03G166 Micromonas commoda
MD09G1209400 Malus domestica
MD17G1191100 Malus domestica
Medtr2g101770 Medicago truncatula
MELO3C024255.2 Cucumis melo
Migut.I00941 Erythranthe guttata
MSTRG.11053 Avicennia marina
Nitab4.5_0001315g0190 Nicotiana tabacum
Nitab4.5_0007217g0010 Nicotiana tabacum
Nn2g11694 Nelumbo nucifera
Nn3g18074 Nelumbo nucifera
Oeu033507.1 Olea europaea
Os04g0691600 Oryza sativa ssp. japonica
Peaxi162Scf00015g00005 Petunia axillaris
PGR102G3343 Punica granatum
PGSC0003DMG400002547 Solanum tuberosum
Phvul.005G168800 Phaseolus vulgaris
Potri.001G184000 Populus trichocarpa
Pp3c11_14630 Physcomitrium patens
Pp3c1_12860 Physcomitrium patens
PRCOL_00005962 Prasinoderma coloniale
Prupe.3G067300 Prunus persica
PSO566G0311 Papaver somniferum
PSO782G0135 Papaver somniferum
QL05p021654 Quercus lobata
RcHm_v2.0_Chr2g0138941 Rosa chinensis
Rhsim08G0223400 Rhododendron simsii
Sabra01G0155400 Salix brachista
SalBow1G4549 Salvia bowleyana
SalBow2G0408 Salvia bowleyana
Sc12g0009460 Simmondsia chinensis
Sed0002776 Sechium edule
SEGI_37104 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02555 Striga asiatica
SGA_v2.0_scaffold69G23360 Striga asiatica
SMO358G0237 Selaginella moellendorffii
Solyc03g120630.4 Solanum lycopersicum
Sp2g12850 Schrenkiella parvula
TAR383G1034 Trochodendron aralioides
TAR626G0023 Trochodendron aralioides
THA.LOC104800422 Tarenaya hassleriana
Thecc.06G092400 Theobroma cacao
Thhalv10001197m.g Eutrema salsugineum
Thhalv10019289m.g Eutrema salsugineum
TPR.G37258 Trifolium pratense
TWI12G0791 Tripterygium wilfordii
TWI75G0440 Tripterygium wilfordii
unitig_46.g18557 Utricularia gibba
vmacro18887 Vaccinium macrocarpon
VMungo1080G0744 Vigna mungo
Zm00001eb367450 Zea mays
Zm00001eb434460 Zea mays

User provided reference genes

Program Settings