Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p02330 Brassica napus
Aa31LG8G15620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis
Actinidia15886 Actinidia chinensis
Ah.10g037740 Amaranthus hybridus
Ah.16g101740 Amaranthus hybridus
AL3G51690 Arabidopsis lyrata
Aqoxy4G02499 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea
AT2G18410 Arabidopsis thaliana
ATR1125G043 Amborella trichopoda
Atru.chr1.1685 Acer truncatum
AUR62009005 Chenopodium quinoa
AUR62023297 Chenopodium quinoa
BcaB03g16641 Brassica carinata
BcaC06g36407 Brassica carinata
BolC7t40839H Brassica oleracea
BraA07t28024Z Brassica rapa
C07p04450 Brassica napus
CAN.G625.27 Capsicum annuum
CANSAT78G1220 Cannabis sativa
CARHR109010 Cardamine hirsuta
Carub.0003s3256 Capsella rubella
Ca_05599_v3 Cicer arietinum L.
CBR_g37698 Chara braunii
Cc07_g08770 Coffea canephora
CDE05G1052 Ceratophyllum demersum
Cfa007919 Carpinus fangiana
Ciclev10011993m.g Citrus clementina
CiPaw.03G061900 Carya illinoinensis
ClCG05G012120 Citrullus lanatus
COL.COLO4_09340 Corchorus olitorius
Cpa.g.sc282.2 Carica papaya
CsaV3_3G020280 Cucumis sativus L.
CSS0038458 Camellia sinensis var. sinensis
CSS0040274 Camellia sinensis var. sinensis
Dinv34819 Davidia involucrata
Duzib138G1322 Durio zibethinus
ECA246G2307 Erigeron canadensis
EL10Ac2g04560 Beta vulgaris
Eucgr.F02499 Eucalyptus grandis
FAN07G0954 Fragaria x ananassa
FAN17G0046 Fragaria x ananassa
FvH4_4g11350 Fragaria vesca
FvH4_4g11432 Fragaria vesca
Glyma.02G226700 Glycine max
Glyma.14G193600 Glycine max
Gohir.1Z049310 Gossypium hirsutum
Gohir.A01G231820 Gossypium hirsutum
Gohir.A06G000200 Gossypium hirsutum
Gohir.A09G249300 Gossypium hirsutum
Gohir.A12G000400 Gossypium hirsutum
Gohir.A12G053400 Gossypium hirsutum
Gohir.D03G000201 Gossypium hirsutum
Gohir.D12G052100 Gossypium hirsutum
Gorai.003G000500 Gossypium raimondii
Gorai.007G000700 Gossypium raimondii
Gorai.008G055200 Gossypium raimondii
GSVIVG01031016001 Vitis vinifera
HanXRQChr12g0375811 Helianthus annuus
Haze_14158 Corylus avellana
Haze_14159 Corylus avellana
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla
HPP92_018993 Vanilla planifolia
Hund13711 Selenicereus undatus
Lalb_Chr10g0103311 Lupinus albus
Lj2A441T56 Lonicera japonica
LjContig00155g0021894 Lotus japonicus
Lsat_1_v5_gn_3_79681 Lactuca sativa
Manes.02G069100 Manihot esculenta
Mapoly0156s0014 Marchantia polymorpha
MCO07G774 Micromonas commoda
MD00G1149900 Malus domestica
Medtr5g070860 Medicago truncatula
MELO3C023751.2 Cucumis melo
Migut.H00221 Erythranthe guttata
MSTRG.17981 Avicennia marina
Nitab4.5_0000912g0170 Nicotiana tabacum
Nitab4.5_0004416g0010 Nicotiana tabacum
Nitab4.5_0014016g0010 Nicotiana tabacum
Nn3g17886 Nelumbo nucifera
Nn7g36094 Nelumbo nucifera
Oeu008432.1 Olea europaea
Os03g0201700 Oryza sativa ssp. japonica
Peaxi162Scf00394g00620 Petunia axillaris
PGR004G1556 Punica granatum
PGSC0003DMG400026405 Solanum tuberosum
Phvul.008G261300 Phaseolus vulgaris
Potri.004G099000 Populus trichocarpa
Potri.017G115566 Populus trichocarpa
Pp3c5_13580 Physcomitrium patens
Prupe.3G142900 Prunus persica
Psat0s1013g0040 Pisum sativum
Psat0s2922g0040 Pisum sativum
PSO017G5051 Papaver somniferum
PSO478G1932 Papaver somniferum
QL02p051191 Quercus lobata
QL02p051195 Quercus lobata
QL02p051229 Quercus lobata
RcHm_v2.0_Chr1g0332721 Rosa chinensis
RcHm_v2.0_Chr6g0273571 Rosa chinensis
Rhsim10G0067700 Rhododendron simsii
Sabra04G0080900 Salix brachista
Sabra17G0095800 Salix brachista
SalBow3G3202 Salvia bowleyana
Sc10g0001120 Simmondsia chinensis
Sed0006429 Sechium edule
SEGI_33346 Sequoiadendron giganteum
SEGI_36511 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13509 Striga asiatica
SHI29124 Sapria himalayana
SMO009G0016 Selaginella moellendorffii
SMO351G0506 Selaginella moellendorffii
Solyc02g086100.4 Solanum lycopersicum
Sopen02g030790 Solanum pennellii
Sp3g31820 Schrenkiella parvula
SpUn0030_0010 Schrenkiella parvula
TAR629G2682 Trochodendron aralioides
THA.LOC104820944 Tarenaya hassleriana
Thecc.04G133100 Theobroma cacao
Thhalv10022737m.g Eutrema salsugineum
TPR.G23017 Trifolium pratense
TWI53G1478 Tripterygium wilfordii
unitig_748.g7283 Utricularia gibba
vmacro05550 Vaccinium macrocarpon
VMungo0647G1142 Vigna mungo
Zm00001eb007750 Zea mays

User provided reference genes

Program Settings