Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17490 Brassica napus
A09p09970 Brassica napus
Aa31LG1G15000 Aethionema arabicum
Actinidia19197 Actinidia chinensis
Ah.02g125010 Amaranthus hybridus
AL8G45060 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.U42JN7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XU9KU6 Arachis hypogaea
AT5G66470 Arabidopsis thaliana
ATR0568G215 Amborella trichopoda
Atru.chr3.626 Acer truncatum
AUR62004085 Chenopodium quinoa
AUR62007597 Chenopodium quinoa
BcaC04g23130 Brassica carinata
BcaNung05721 Brassica carinata
BolC7t43065H Brassica oleracea
BolC9t54073H Brassica oleracea
BraA07t29469Z Brassica rapa
BraA09t36643Z Brassica rapa
C07p25420 Brassica napus
C09p11830 Brassica napus
CAN.G79.63 Capsicum annuum
CANSAT01G1473 Cannabis sativa
CARHR281280 Cardamine hirsuta
Carub.0008s2805 Capsella rubella
Ca_22296_v3 Cicer arietinum L.
Ca_22326_v3 Cicer arietinum L.
CBR_g20394 Chara braunii
Cc07_g09840 Coffea canephora
CDE05G0040 Ceratophyllum demersum
Cfa004338 Carpinus fangiana
Ciclev10025723m.g Citrus clementina
CiPaw.02G020100 Carya illinoinensis
ClCG07G008640 Citrullus lanatus
COL.COLO4_22041 Corchorus olitorius
Cpa.g.sc6.151 Carica papaya
Cpa.g.sc6.152 Carica papaya
Cre02.g141706 Chlamydomonas reinhardtii
CsaV3_4G005500 Cucumis sativus L.
CSS0025793 Camellia sinensis var. sinensis
Dinv40011 Davidia involucrata
Duzib187G1134 Durio zibethinus
ECA238G4516 Erigeron canadensis
ECA238G4856 Erigeron canadensis
EL10Ac7g17808 Beta vulgaris
EL10As8g23915 Beta vulgaris
Eucgr.I02414 Eucalyptus grandis
FAN19G0783 Fragaria x ananassa
FAN23G2295 Fragaria x ananassa
FAN28G2106 Fragaria x ananassa
FvH4_1g12860 Fragaria vesca
FvH4_1g12880 Fragaria vesca
Glyma.02G054500 Glycine max
Glyma.16G134900 Glycine max
Gohir.A10G096100 Gossypium hirsutum
Gohir.D10G092000 Gossypium hirsutum
Gorai.011G101000 Gossypium raimondii
GSVIVG01018924001 Vitis vinifera
HanXRQChr14g0440551 Helianthus annuus
Haze_15063 Corylus avellana
Hma1.2p1_0224F.1_g094460 Hydrangea macrophylla
HPP92_023424 Vanilla planifolia
Hund13996 Selenicereus undatus
Lalb_Chr04g0255401 Lupinus albus
Lj4A204G66 Lonicera japonica
Lj4g0009010 Lotus japonicus
Lsat_1_v5_gn_2_77400 Lactuca sativa
Manes.02G096500 Manihot esculenta
Mapoly0055s0018 Marchantia polymorpha
MBI16_g08799_MAGBIO Magnolia biondii
MBI19_g39780_MAGBIO Magnolia biondii
MCO12G015 Micromonas commoda
MD02G1143800 Malus domestica
MD15G1257100 Malus domestica
Medtr8g077125 Medicago truncatula
MELO3C016397.2 Cucumis melo
Migut.H02527 Erythranthe guttata
MSTRG.2482 Avicennia marina
Nitab4.5_0000376g0120 Nicotiana tabacum
Nitab4.5_0001645g0100 Nicotiana tabacum
Nn1g04925 Nelumbo nucifera
Oeu012594.1 Olea europaea
Os05g0567300 Oryza sativa ssp. japonica
Peaxi162Scf00468g00721 Petunia axillaris
PGR119G0389 Punica granatum
PGSC0003DMG400010720 Solanum tuberosum
PGSC0003DMG400022967 Solanum tuberosum
Phvul.003G255600 Phaseolus vulgaris
Potri.007G021900 Populus trichocarpa
Pp3c26_7390 Physcomitrium patens
PRCOL_00002338 Prasinoderma coloniale
Prupe.7G157900 Prunus persica
Psat4g094880 Pisum sativum
PSO170G4293 Papaver somniferum
PSO170G4820 Papaver somniferum
PSO761G0239 Papaver somniferum
PSO764G0271 Papaver somniferum
QL06p047107 Quercus lobata
RcHm_v2.0_Chr2g0100961 Rosa chinensis
Rhsim08G0119600 Rhododendron simsii
Sabra07G0019000 Salix brachista
SalBow1G2336 Salvia bowleyana
SalBow1G3765 Salvia bowleyana
SalBow1G4393 Salvia bowleyana
SalBow1G5505 Salvia bowleyana
SalBow1G6590 Salvia bowleyana
SalBow1G6648 Salvia bowleyana
SalBow1G7358 Salvia bowleyana
SalBow8G4183 Salvia bowleyana
SalBow8G4735 Salvia bowleyana
SalBow8G5274 Salvia bowleyana
Sc07g0000830 Simmondsia chinensis
Sed0009405 Sechium edule
Sed0010743 Sechium edule
SEGI_34307 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39144 Striga asiatica
SMO367G0171 Selaginella moellendorffii
Solyc02g077280.4 Solanum lycopersicum
Sopen02g022200 Solanum pennellii
Sp2g30250 Schrenkiella parvula
TAR629G0960 Trochodendron aralioides
THA.LOC104821298 Tarenaya hassleriana
Thecc.01G031600 Theobroma cacao
Thhalv10004267m.g Eutrema salsugineum
TPR.G24106 Trifolium pratense
TWI09G0486 Tripterygium wilfordii
unitig_899.g14981 Utricularia gibba
vmacro17813 Vaccinium macrocarpon
VMungo0251G2618 Vigna mungo
Zm00001eb054930 Zea mays
Zm00001eb343970 Zea mays

User provided reference genes

Program Settings