Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12120 Brassica napus
Aa31LG11G350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis
Actinidia02782 Actinidia chinensis
Actinidia23218 Actinidia chinensis
Actinidia32626 Actinidia chinensis
AL8G34810 Arabidopsis lyrata
Aqoxy4G02443 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea
AT5G58575 Arabidopsis thaliana
ATR0681G053 Amborella trichopoda
Atru.chr3.4142 Acer truncatum
AUR62002337 Chenopodium quinoa
AUR62023851 Chenopodium quinoa
BcaB01g04505 Brassica carinata
BcaC01g06637 Brassica carinata
BcaC01g06639 Brassica carinata
BolC3t13867H Brassica oleracea
BraA03t10524Z Brassica rapa
C03p14210 Brassica napus
CAN.G1095.10 Capsicum annuum
CANSAT54G2854 Cannabis sativa
CARHR272410 Cardamine hirsuta
Carub.0008s1918 Capsella rubella
Ca_14969_v3 Cicer arietinum L.
Cc01_g14560 Coffea canephora
CDE10G0962 Ceratophyllum demersum
CDE10G1344 Ceratophyllum demersum
Cfa011735 Carpinus fangiana
Ciclev10029374m.g Citrus clementina
CiPaw.13G073700 Carya illinoinensis
CiPaw.14G056700 Carya illinoinensis
ClCG03G000500 Citrullus lanatus
COL.COLO4_11080 Corchorus olitorius
Cpa.g.sc2.418 Carica papaya
Cre17.g719550 Chlamydomonas reinhardtii
CsaV3_1G036430 Cucumis sativus L.
CSS0037016 Camellia sinensis var. sinensis
CSS0047754 Camellia sinensis var. sinensis
DCAR_015647 Daucus carota
Duzib168G2258 Durio zibethinus
Duzib170G0863 Durio zibethinus
ECA248G1932 Erigeron canadensis
EL10Ac3g05994 Beta vulgaris
Eucgr.B02232 Eucalyptus grandis
FAN11G1452 Fragaria x ananassa
FAN16G3099 Fragaria x ananassa
FAN21G0787 Fragaria x ananassa
FAN25G2223 Fragaria x ananassa
FvH4_3g39150 Fragaria vesca
Glyma.11G168600 Glycine max
Glyma.18G060000 Glycine max
Gohir.A05G107700 Gossypium hirsutum
Gohir.A13G233500 Gossypium hirsutum
Gohir.D05G107900 Gossypium hirsutum
Gohir.D13G239100 Gossypium hirsutum
Gorai.009G112000 Gossypium raimondii
Gorai.013G270000 Gossypium raimondii
GSVIVG01024692001 Vitis vinifera
HanXRQChr11g0334701 Helianthus annuus
Haze_24375 Corylus avellana
HPP92_012020 Vanilla planifolia
HPP92_013780 Vanilla planifolia
Hund06617 Selenicereus undatus
Lalb_Chr18g0051191 Lupinus albus
Lalb_Chr20g0114841 Lupinus albus
Lj1P130T21 Lonicera japonica
Lj6g0019722 Lotus japonicus
Lsat_1_v5_gn_5_173181 Lactuca sativa
Manes.17G003200 Manihot esculenta
Mapoly0008s0254 Marchantia polymorpha
MBI03_g03955_MAGBIO Magnolia biondii
MCO04G081 Micromonas commoda
MD03G1063100 Malus domestica
MD11G1066600 Malus domestica
MD11G1066800 Malus domestica
MD11G1071300 Malus domestica
MD11G1071400 Malus domestica
MD11G1152800 Malus domestica
MD11G1153100 Malus domestica
Medtr3g465040 Medicago truncatula
Medtr6g460490 Medicago truncatula
MELO3C020526.2 Cucumis melo
Migut.N00147 Erythranthe guttata
MSTRG.10034 Avicennia marina
Nitab4.5_0002043g0030 Nicotiana tabacum
Nitab4.5_0013485g0010 Nicotiana tabacum
Nn2g14523 Nelumbo nucifera
Nn2g14856 Nelumbo nucifera
Oeu031050.1 Olea europaea
Os05g0351500 Oryza sativa ssp. japonica
Peaxi162Scf00540g00015 Petunia axillaris
PGR031G2980 Punica granatum
PGSC0003DMG400030447 Solanum tuberosum
Phvul.006G070800 Phaseolus vulgaris
Potri.001G279700 Populus trichocarpa
Potri.009G074400 Populus trichocarpa
Pp3c4_14820 Physcomitrium patens
Pp3c7_14690 Physcomitrium patens
Prupe.6G053100 Prunus persica
Psat0s2070g0120 Pisum sativum
PSO017G3188 Papaver somniferum
PSO170G4292 Papaver somniferum
QL01p039263 Quercus lobata
RcHm_v2.0_Chr5g0070551 Rosa chinensis
Rhsim13G0066700 Rhododendron simsii
Sabra09G0056500 Salix brachista
Sabra16G0173300 Salix brachista
Sc06g0010410 Simmondsia chinensis
Sed0014404 Sechium edule
Sed0015986 Sechium edule
SEGI_16655 Sequoiadendron giganteum
SGA_v2.0_scaffold371G50155 Striga asiatica
SMO358G0374 Selaginella moellendorffii
Solyc06g082160.4 Solanum lycopersicum
Sopen06g033540 Solanum pennellii
Sp6g20270 Schrenkiella parvula
TAR131G0002 Trochodendron aralioides
TAR623G0738 Trochodendron aralioides
TAR633G2447 Trochodendron aralioides
THA.LOC104799390 Tarenaya hassleriana
Thecc.09G353200 Theobroma cacao
Thhalv10014805m.g Eutrema salsugineum
TPR.G32896 Trifolium pratense
TWI31G1135 Tripterygium wilfordii
TWI79G0924 Tripterygium wilfordii
unitig_62.g23487 Utricularia gibba
vmacro02942 Vaccinium macrocarpon
VMungo0540G0986 Vigna mungo
Zm00001eb286290 Zea mays

User provided reference genes

Program Settings