Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p32090 Brassica napus
Aa31LG6G8450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1289 Anthoceros agrestis
Actinidia23324 Actinidia chinensis
Ah.05g177990 Amaranthus hybridus
Ah.05g178000 Amaranthus hybridus
Ah.12g061790 Amaranthus hybridus
AL1G48940 Arabidopsis lyrata
Aqoxy5G02601 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SEU8EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VB64T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XJI1XC Arachis hypogaea
AT1G34380 Arabidopsis thaliana
ATR1134G043 Amborella trichopoda
Atru.chr13.1806 Acer truncatum
Atru.chr13.1816 Acer truncatum
AUR62004659 Chenopodium quinoa
AUR62023576 Chenopodium quinoa
BcaB07g33127 Brassica carinata
BcaC08g43776 Brassica carinata
BolC6t36287H Brassica oleracea
BraA09t38748Z Brassica rapa
C06p11540 Brassica napus
CAN.G61.32 Capsicum annuum
CANSAT56G4197 Cannabis sativa
CARHR033840 Cardamine hirsuta
Carub.0001s3253 Capsella rubella
Ca_14000_v3 Cicer arietinum L.
Ca_27969_v3 Cicer arietinum L.
CBR_g22422 Chara braunii
CBR_g56098 Chara braunii
Cc00_g04830 Coffea canephora
CDE06G1238 Ceratophyllum demersum
Cfa014371 Carpinus fangiana
Ciclev10001512m.g Citrus clementina
CiPaw.16G062400 Carya illinoinensis
ClCG11G008230 Citrullus lanatus
COL.COLO4_36657 Corchorus olitorius
Cpa.g.sc66.54 Carica papaya
CsaV3_2G033430 Cucumis sativus L.
CSS0002602 Camellia sinensis var. sinensis
CSS0046436 Camellia sinensis var. sinensis
DCAR_023098 Daucus carota
Dinv41689 Davidia involucrata
Dinv41690 Davidia involucrata
Duzib177G0330 Durio zibethinus
EL10Ac1g00070 Beta vulgaris
Eucgr.F04135 Eucalyptus grandis
FAN20G1782 Fragaria x ananassa
FAN24G2303 Fragaria x ananassa
FAN27G0258 Fragaria x ananassa
FvH4_2g12160 Fragaria vesca
Glyma.02G074400 Glycine max
Glyma.16G156300 Glycine max
Gohir.A05G274500 Gossypium hirsutum
Gohir.D05G276700 Gossypium hirsutum
Gorai.009G289700 Gossypium raimondii
GSVIVG01034499001 Vitis vinifera
HanXRQChr04g0107411 Helianthus annuus
Haze_17917 Corylus avellana
HPP92_000081 Vanilla planifolia
HPP92_000083 Vanilla planifolia
HPP92_000088 Vanilla planifolia
Hund27079 Selenicereus undatus
Lalb_Chr03g0035881 Lupinus albus
Lalb_Chr03g0035891 Lupinus albus
Lj2g0016315 Lotus japonicus
Lj7A293G47 Lonicera japonica
Lsat_1_v5_gn_1_10481 Lactuca sativa
Lsat_1_v5_gn_3_113600 Lactuca sativa
Lsat_1_v5_gn_3_113620 Lactuca sativa
Lsat_1_v5_gn_7_7380 Lactuca sativa
Manes.18G100000 Manihot esculenta
Mapoly0035s0044 Marchantia polymorpha
MBI17_g01761_MAGBIO Magnolia biondii
MBI17_g15293_MAGBIO Magnolia biondii
MD05G1040800 Malus domestica
MD10G1046800 Malus domestica
Medtr6g033525 Medicago truncatula
MELO3C008115.2 Cucumis melo
Migut.C01243 Erythranthe guttata
MSTRG.1511 Avicennia marina
MSTRG.1517 Avicennia marina
Nitab4.5_0000159g0230 Nicotiana tabacum
Nitab4.5_0006099g0030 Nicotiana tabacum
Oeu021010.1 Olea europaea
Os01g0874800 Oryza sativa ssp. japonica
Peaxi162Scf00495g00015 Petunia axillaris
PGR102G3248 Punica granatum
PGR119G0141 Punica granatum
PGSC0003DMG400009236 Solanum tuberosum
Phvul.004G084494 Phaseolus vulgaris
Potri.013G114400 Populus trichocarpa
Pp3c1_23520 Physcomitrium patens
Prupe.8G055700 Prunus persica
Psat1g098600 Pisum sativum
PSO017G5512 Papaver somniferum
QL02p034064 Quercus lobata
RcHm_v2.0_Chr6g0272141 Rosa chinensis
Rhsim04G0161600 Rhododendron simsii
Rhsim06G0097100 Rhododendron simsii
Sabra13G0096800 Salix brachista
Sc23g0001130 Simmondsia chinensis
Sed0004103 Sechium edule
SEGI_14270 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32466 Striga asiatica
SMO174G0079 Selaginella moellendorffii
SMO174G0158 Selaginella moellendorffii
SMO210G0002 Selaginella moellendorffii
SMO210G0005 Selaginella moellendorffii
SMO271G0001 Selaginella moellendorffii
SMO271G0041 Selaginella moellendorffii
SMO308G0008 Selaginella moellendorffii
SMO308G0023 Selaginella moellendorffii
SMO308G0062 Selaginella moellendorffii
Solyc11g017230.2 Solanum lycopersicum
Sopen11g009130 Solanum pennellii
Sp1g29600 Schrenkiella parvula
TAR381G0932 Trochodendron aralioides
THA.LOC104806782 Tarenaya hassleriana
Thecc.08G202800 Theobroma cacao
Thhalv10008072m.g Eutrema salsugineum
TPR.G36660 Trifolium pratense
TWI60G0628 Tripterygium wilfordii
unitig_747.g21468 Utricularia gibba
vmacro12496 Vaccinium macrocarpon
VMungo0464G0319 Vigna mungo
VMungo0464G1554 Vigna mungo
Zm00001eb146190 Zea mays
Zm00001eb366480 Zea mays
Zm00001eb366510 Zea mays

User provided reference genes

Program Settings