Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09900 Brassica napus
Aa31LG1G14440 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis
Actinidia07431 Actinidia chinensis
Actinidia26399 Actinidia chinensis
Ah.14g080180 Amaranthus hybridus
AL6G31730 Arabidopsis lyrata
Aqoxy5G00491 Aquilegia oxysepala
Aqoxy7G02129 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea
AT5G20170 Arabidopsis thaliana
ATR1156G034 Amborella trichopoda
Atru.chr7.1212 Acer truncatum
AUR62011094 Chenopodium quinoa
AUR62033484 Chenopodium quinoa
AUR62041250 Chenopodium quinoa
BolC3t13620H Brassica oleracea
BraA03t10303Z Brassica rapa
C03p11480 Brassica napus
CAN.G1289.8 Capsicum annuum
CAN.G377.10 Capsicum annuum
CAN.G925.3 Capsicum annuum
CANSAT11G2564 Cannabis sativa
CARHR192650 Cardamine hirsuta
Carub.0006s1857 Capsella rubella
Ca_21691_v3 Cicer arietinum L.
CBR_g48370 Chara braunii
Cc06_g08730 Coffea canephora
CDE01G0041 Ceratophyllum demersum
CDE11G0857 Ceratophyllum demersum
Cfa003353 Carpinus fangiana
Ciclev10007689m.g Citrus clementina
CiPaw.04G170200 Carya illinoinensis
ClCG08G000940 Citrullus lanatus
COL.COLO4_05778 Corchorus olitorius
COL.COLO4_05779 Corchorus olitorius
Cpa.g.sc75.51 Carica papaya
Cpa.g.sc75.52 Carica papaya
CsaV3_5G040100 Cucumis sativus L.
CSS0033485 Camellia sinensis var. sinensis
DCAR_014873 Daucus carota
Dinv36541 Davidia involucrata
Duzib187G1826 Durio zibethinus
ECA236G0249 Erigeron canadensis
EL10Ac8g18623 Beta vulgaris
Eucgr.C04186 Eucalyptus grandis
FAN08G0676 Fragaria x ananassa
FAN13G2896 Fragaria x ananassa
FAN18G1442 Fragaria x ananassa
FAN18G1628 Fragaria x ananassa
FAN18G2691 Fragaria x ananassa
FvH4_5g23630 Fragaria vesca
Glyma.05G009700 Glycine max
Glyma.14G007400 Glycine max
Glyma.17G117600 Glycine max
Gohir.A05G017800 Gossypium hirsutum
Gohir.A07G035000 Gossypium hirsutum
Gohir.D05G018700 Gossypium hirsutum
Gohir.D07G039000 Gossypium hirsutum
Gorai.001G041100 Gossypium raimondii
Gorai.009G019100 Gossypium raimondii
GSVIVG01015509001 Vitis vinifera
GSVIVG01027692001 Vitis vinifera
HanXRQChr04g0104201 Helianthus annuus
Haze_25609 Corylus avellana
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla
HPP92_009844 Vanilla planifolia
Hund26492 Selenicereus undatus
Lalb_Chr07g0178861 Lupinus albus
Lj4g0014642 Lotus japonicus
Lj7C631G5 Lonicera japonica
Lsat_1_v5_gn_8_59020 Lactuca sativa
Lsat_1_v5_gn_8_82580 Lactuca sativa
Manes.06G049700 Manihot esculenta
Mapoly0010s0026 Marchantia polymorpha
MD02G1034800 Malus domestica
MD15G1175600 Malus domestica
Medtr4g114100 Medicago truncatula
MELO3C022187.2 Cucumis melo
Migut.E01544 Erythranthe guttata
MSTRG.14036 Avicennia marina
Nitab4.5_0007523g0010 Nicotiana tabacum
Nitab4.5_0010819g0010 Nicotiana tabacum
Nn2g12002 Nelumbo nucifera
Nn8g39410 Nelumbo nucifera
Oeu018459.1 Olea europaea
Oeu021589.1 Olea europaea
Os12g0638600 Oryza sativa ssp. japonica
Peaxi162Scf00984g00027 Petunia axillaris
PGR102G3358 Punica granatum
PGSC0003DMG400020667 Solanum tuberosum
Phvul.003G161800 Phaseolus vulgaris
Potri.015G057100 Populus trichocarpa
Pp3c19_8370 Physcomitrium patens
Pp3c3_25450 Physcomitrium patens
Prupe.7G240500 Prunus persica
Psat4g039400 Pisum sativum
PSO170G3915 Papaver somniferum
PSO455G0207 Papaver somniferum
QL02p087915 Quercus lobata
RcHm_v2.0_Chr7g0212931 Rosa chinensis
Rhsim03G0247300 Rhododendron simsii
Sabra15G0082400 Salix brachista
Sabra15G0082900 Salix brachista
SalBow1G1471 Salvia bowleyana
Sc08g0006730 Simmondsia chinensis
Sc08g0006740 Simmondsia chinensis
Sed0002176 Sechium edule
SEGI_37567 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38051 Striga asiatica
SHI18656 Sapria himalayana
SHI18657 Sapria himalayana
SMO200G0046 Selaginella moellendorffii
Solyc12g006650.2 Solanum lycopersicum
Sopen12g002600 Solanum pennellii
Sp6g24230 Schrenkiella parvula
TAR362G1246 Trochodendron aralioides
TAR625G1387 Trochodendron aralioides
TAR626G0958 Trochodendron aralioides
TAR636G0633 Trochodendron aralioides
THA.LOC104799647 Tarenaya hassleriana
Thecc.09G123800 Theobroma cacao
Thhalv10012923m.g Eutrema salsugineum
TPR.G10691 Trifolium pratense
unitig_578.g16582 Utricularia gibba
vmacro06121 Vaccinium macrocarpon
vmacro06181 Vaccinium macrocarpon
VMungo1215G0752 Vigna mungo
Zm00001eb207940 Zea mays
Zm00001eb334260 Zea mays

User provided reference genes

Program Settings