Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p05350 Brassica napus
A09p47410 Brassica napus
Aa31sc434G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis
Actinidia02255 Actinidia chinensis
AL5G35530 Arabidopsis lyrata
Aqoxy2G00337 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea
AT3G54480 Arabidopsis thaliana
ATR0075G002 Amborella trichopoda
Atru.chr12.1174 Acer truncatum
Atru.chr12.1378 Acer truncatum
AUR62026845 Chenopodium quinoa
AUR62037202 Chenopodium quinoa
AUR62037203 Chenopodium quinoa
BcaB01g00190 Brassica carinata
BcaB02g08444 Brassica carinata
BcaB05g22681 Brassica carinata
BcaC02g09066 Brassica carinata
BcaC08g45413 Brassica carinata
BolC4t25378H Brassica oleracea
BolC8t50570H Brassica oleracea
BolC8t50572H Brassica oleracea
BolC8t50576H Brassica oleracea
BraA04t16235Z Brassica rapa
BraA09t40201Z Brassica rapa
C04p38040 Brassica napus
C08p29620 Brassica napus
C08p29670 Brassica napus
CAN.G476.5 Capsicum annuum
CANSAT01G1797 Cannabis sativa
CANSAT56G4499 Cannabis sativa
CARHR164380 Cardamine hirsuta
Carub.0005s2110 Capsella rubella
Ca_27127_v3 Cicer arietinum L.
CBR_g30624 Chara braunii
Cc02_g29700 Coffea canephora
CDE12G0962 Ceratophyllum demersum
Cfa010889 Carpinus fangiana
Ciclev10002701m.g Citrus clementina
Ciclev10005678m.g Citrus clementina
CiPaw.13G012200 Carya illinoinensis
ClCG05G026720 Citrullus lanatus
COL.COLO4_21458 Corchorus olitorius
Cpa.g.sc223.13 Carica papaya
CsaV3_5G036650 Cucumis sativus L.
CSS0025918 Camellia sinensis var. sinensis
CSS0041352 Camellia sinensis var. sinensis
CSS0050126 Camellia sinensis var. sinensis
DCAR_031830 Daucus carota
Dinv09262 Davidia involucrata
Dinv09283 Davidia involucrata
Duzib128G0282 Durio zibethinus
ECA248G0357 Erigeron canadensis
EL10Ac2g02824 Beta vulgaris
Eucgr.G03245 Eucalyptus grandis
FAN03G1179 Fragaria x ananassa
FAN06G1602 Fragaria x ananassa
FAN10G0293 Fragaria x ananassa
FvH4_7g02750 Fragaria vesca
Glyma.11G154400 Glycine max
Gohir.A03G127900 Gossypium hirsutum
Gohir.A05G401400 Gossypium hirsutum
Gohir.D04G013700 Gossypium hirsutum
Gohir.D04G014500 Gossypium hirsutum
Gorai.012G017000 Gossypium raimondii
GSVIVG01000659001 Vitis vinifera
HanXRQChr11g0341831 Helianthus annuus
HanXRQChr11g0351531 Helianthus annuus
Haze_03068 Corylus avellana
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla
HPP92_025011 Vanilla planifolia
Hund15721 Selenicereus undatus
Lalb_Chr04g0264041 Lupinus albus
Lj3g0013196 Lotus japonicus
Lj7A580T60 Lonicera japonica
Lsat_1_v5_gn_1_114801 Lactuca sativa
Lsat_1_v5_gn_2_43661 Lactuca sativa
Manes.08G167250 Manihot esculenta
Manes.11G001251 Manihot esculenta
Manes.11G004000 Manihot esculenta
MBI13_g36285_MAGBIO Magnolia biondii
MD02G1290300 Malus domestica
Medtr3g017610 Medicago truncatula
MELO3C012462.2 Cucumis melo
Migut.N01795 Erythranthe guttata
Migut.N01830 Erythranthe guttata
Migut.O00720 Erythranthe guttata
MSTRG.5061 Avicennia marina
Nitab4.5_0000320g0120 Nicotiana tabacum
Nitab4.5_0001681g0050 Nicotiana tabacum
Nn2g14899 Nelumbo nucifera
Nn8g40481 Nelumbo nucifera
Oeu015683.2 Olea europaea
Os07g0659700 Oryza sativa ssp. japonica
Peaxi162Scf01732g00026 Petunia axillaris
PGR031G3892 Punica granatum
PGSC0003DMG401003979 Solanum tuberosum
Phvul.005G029600 Phaseolus vulgaris
Potri.001G025601 Populus trichocarpa
Pp3c5_2560 Physcomitrium patens
PRCOL_00001745 Prasinoderma coloniale
Prupe.2G032200 Prunus persica
Psat5g219280 Pisum sativum
Psat7g193960 Pisum sativum
PSO339G4535 Papaver somniferum
PSO384G0859 Papaver somniferum
QL04p014297 Quercus lobata
RcHm_v2.0_Chr1g0322011 Rosa chinensis
Rhsim01G0123700 Rhododendron simsii
Sabra01G0018900 Salix brachista
Sc10g0004360 Simmondsia chinensis
Sed0001833 Sechium edule
SEGI_28535 Sequoiadendron giganteum
SGA_v2.0_scaffold232G43514 Striga asiatica
SMO172G0212 Selaginella moellendorffii
Solyc11g005590.1 Solanum lycopersicum
Sopen11g001560 Solanum pennellii
Sp5g07940 Schrenkiella parvula
TAR369G0753 Trochodendron aralioides
THA.LOC104824190 Tarenaya hassleriana
Thecc.10G166400 Theobroma cacao
Thhalv10010628m.g Eutrema salsugineum
TPR.G17810 Trifolium pratense
TPR.G7208 Trifolium pratense
TWI63G0596 Tripterygium wilfordii
unitig_8.g4774 Utricularia gibba
vmacro12691 Vaccinium macrocarpon
VMungo1080G1708 Vigna mungo
Zm00001eb329830 Zea mays

User provided reference genes

Program Settings