Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26510 Brassica napus
Aa31LG7G9800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis
Actinidia09658 Actinidia chinensis
Actinidia20698 Actinidia chinensis
Ah.02g130720 Amaranthus hybridus
AL1G40610 Arabidopsis lyrata
Aqoxy5G03416 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea
AT1G24310 Arabidopsis thaliana
ATR0561G264 Amborella trichopoda
Atru.chr11.2304 Acer truncatum
AUR62005599 Chenopodium quinoa
AUR62024128 Chenopodium quinoa
BcaB03g12064 Brassica carinata
BcaC01g01637 Brassica carinata
BolC3t19647H Brassica oleracea
BraA08t34603Z Brassica rapa
C03p73530 Brassica napus
CAN.G34.9 Capsicum annuum
CANSAT01G2967 Cannabis sativa
CARHR026780 Cardamine hirsuta
CARHR184250 Cardamine hirsuta
CARHR217890 Cardamine hirsuta
Carub.0001s2576 Capsella rubella
Ca_16474_v3 Cicer arietinum L.
CBR_g21943 Chara braunii
CBR_g39502 Chara braunii
Cc00_g13550 Coffea canephora
CDE02G4251 Ceratophyllum demersum
CDE06G2258 Ceratophyllum demersum
Cfa009332 Carpinus fangiana
Cfa009352 Carpinus fangiana
Ciclev10031923m.g Citrus clementina
CiPaw.06G101100 Carya illinoinensis
ClCG11G013770 Citrullus lanatus
COL.COLO4_20379 Corchorus olitorius
Cpa.g.sc43.12 Carica papaya
Cre12.g542950 Chlamydomonas reinhardtii
CsaV3_5G030360 Cucumis sativus L.
CSS0022532 Camellia sinensis var. sinensis
CSS0029993 Camellia sinensis var. sinensis
DCAR_031192 Daucus carota
Dinv14825 Davidia involucrata
Duzib251G0036 Durio zibethinus
ECA233G5976 Erigeron canadensis
EL10Ac6g13481 Beta vulgaris
Eucgr.B03481 Eucalyptus grandis
FAN03G3372 Fragaria x ananassa
FAN04G0535 Fragaria x ananassa
FAN04G0683 Fragaria x ananassa
FAN04G2616 Fragaria x ananassa
FAN07G2304 Fragaria x ananassa
FAN07G2604 Fragaria x ananassa
FAN21G1414 Fragaria x ananassa
FAN23G0106 Fragaria x ananassa
FAN24G3446 Fragaria x ananassa
FAN27G1928 Fragaria x ananassa
FvH4_4g23970 Fragaria vesca
Glyma.11G249200 Glycine max
Glyma.18G008100 Glycine max
Gohir.A03G127000 Gossypium hirsutum
Gohir.D02G150400 Gossypium hirsutum
Gorai.005G168700 Gossypium raimondii
GSVIVG01010442001 Vitis vinifera
HanXRQChr03g0071651 Helianthus annuus
HanXRQChr08g0207671 Helianthus annuus
Haze_12392 Corylus avellana
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla
HPP92_023193 Vanilla planifolia
Hund06080 Selenicereus undatus
Lalb_Chr12g0206321 Lupinus albus
Lj1g0012703 Lotus japonicus
Lj3A1066G68 Lonicera japonica
Lsat_1_v5_gn_8_149221 Lactuca sativa
Manes.13G018200 Manihot esculenta
Mapoly0010s0010 Marchantia polymorpha
MBI11_g07451_MAGBIO Magnolia biondii
MCO04G375 Micromonas commoda
MD13G1116800 Malus domestica
MD16G1117500 Malus domestica
Medtr3g085590 Medicago truncatula
MELO3C011875.2 Cucumis melo
Migut.K00712 Erythranthe guttata
Migut.K01177 Erythranthe guttata
MSTRG.7992 Avicennia marina
Nitab4.5_0000492g0130 Nicotiana tabacum
Nitab4.5_0002026g0100 Nicotiana tabacum
Nn3g16502 Nelumbo nucifera
Oeu029609.1 Olea europaea
Oeu036880.1 Olea europaea
Os07g0295400 Oryza sativa ssp. japonica
Peaxi162Scf00518g00512 Petunia axillaris
PGR102G2583 Punica granatum
Phvul.001G260500 Phaseolus vulgaris
Potri.008G176100 Populus trichocarpa
Potri.010G059100 Populus trichocarpa
Pp3c10_15930 Physcomitrium patens
Pp3c10_15937 Physcomitrium patens
Pp3c14_14130 Physcomitrium patens
PRCOL_00001041 Prasinoderma coloniale
Prupe.1G228700 Prunus persica
Psat5g094800 Pisum sativum
PSO063G3255 Papaver somniferum
PSO782G2816 Papaver somniferum
QL03p053757 Quercus lobata
RcHm_v2.0_Chr4g0430621 Rosa chinensis
Rhsim12G0102200 Rhododendron simsii
Sabra10G0046500 Salix brachista
SalBow2G2019 Salvia bowleyana
Sc04g0004640 Simmondsia chinensis
Sed0012291 Sechium edule
Sed0028059 Sechium edule
SEGI_23869 Sequoiadendron giganteum
SEGI_29251 Sequoiadendron giganteum
SEGI_30692 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04762 Striga asiatica
SHI17953 Sapria himalayana
Solyc12g035650.2 Solanum lycopersicum
Sopen12g015910 Solanum pennellii
Sp1g23460 Schrenkiella parvula
TAR622G0739 Trochodendron aralioides
THA.LOC104825515 Tarenaya hassleriana
Thecc.02G212400 Theobroma cacao
Thhalv10008300m.g Eutrema salsugineum
TWI36G0663 Tripterygium wilfordii
TWI36G1659 Tripterygium wilfordii
TWI75G1563 Tripterygium wilfordii
VMungo1383G3287 Vigna mungo
Zm00001eb305390 Zea mays

User provided reference genes

Program Settings